DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ranbp21 and ebo

DIOPT Version :9

Sequence 1:NP_001285453.1 Gene:Ranbp21 / 32970 FlyBaseID:FBgn0031051 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_001284739.1 Gene:ebo / 47141 FlyBaseID:FBgn0266572 Length:1054 Species:Drosophila melanogaster


Alignment Length:1171 Identity:227/1171 - (19%)
Similarity:377/1171 - (32%) Gaps:427/1171 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AAELASAIDLVM---NPMTQQQARLEAYMACERFKEESPMCAQVGLFLASSPQS--NQQVRHFGL 70
            ||.|.:...|:.   .|.|....:.|.......||.: |...|:.|.:|:|..:  ||.:..|..
  Fly     3 AASLTTVEGLLQEFYQPSTSNARKREIETNLLAFKSQ-PEAWQLCLRVATSSDTTENQFLWFFST 66

  Fly    71 QLIEYTIKYRWNCITHEEKVYIKD---NAIKMLNVGVGPAEDRSLLPTKDALSRIIVEMIKREWP 132
            ..:|:||..||..:|..:|..:::   |:...|......|:..     :|.|:::|..:.|||:|
  Fly    67 STLEHTITRRWTQLTSTDKTLLRETLWNSYAQLVATPNVAKRH-----RDTLAQLIALLGKREFP 126

  Fly   133 QQWSDLLPELSQAC---TKGEAQTELVLLVFLRLVEDVALLQTIESNQRRKDMYQALNNNMNDIF 194
            :|  |  |...|.|   ||...|..:.||....  |:|...:...:.:.::..|..::..:.|:.
  Fly   127 EQ--D--PNYMQHCMELTKTRFQLGINLLKITS--EEVVSNRGDLTTEWKQYFYSCISMCVPDVL 185

  Fly   195 EF---FLRLVEQHV------TAFRETTRLCNYTKANAHSRVVEMVLLTLSG----FVEWVSIQHI 246
            :.   :|.:...|:      |....|....:.|.|..:...:...:|.|.|    .|.|:..:.|
  Fly   186 DLVTKYLLIAVCHINGKDIQTTIPNTLMDFSLTSALPNDNQLSSSILDLLGCVQHLVSWIRTELI 250

  Fly   247 MSSNGKLMHFLCI----------------LLNDKAF-----------QCNAAECLAQITNRKGQT 284
              |...||..|.:                :||:..:           .......|.|..|.:.|:
  Fly   251 --SEYFLMSILDLSQWRPAHEPISLAALSVLNELLYLQKPLPFPGPLMGGVTSLLEQHNNNRRQS 313

  Fly   285 K----ERKPLLQLFN--------EEP------LRYIYQASQIPADTSSTLAVEQHLNFLKKL--- 328
            :    :.:.||:|:.        :||      |..:|         |.|..:...|:|.:||   
  Fly   314 EMYSDKFRELLRLYTTKYAAKLMQEPDLLETFLNLLY---------SCTTELHGALDFTEKLEIW 369

  Fly   329 LQVLNGMAQ-------------QLV---------------------ALWGKD-DATQRPVHLEVL 358
            ..::.|:||             |||                     .|...| .||:....|:..
  Fly   370 TPIIKGIAQHPAKITRYNNVLTQLVDEIMRRTQFEANKPELEVLDNELMEDDTSATEWQQFLDQC 434

  Fly   359 LECLLLLV----------------QHPSL-------GLSHGSALIWQLLLKHEPSS-----KDFA 395
            .|.|.||.                ..|.:       .|.||||..::...|.:.::     :|||
  Fly   435 FESLALLANTRGAHIVFAQVYNHWSRPQMYLLSLEHALDHGSARSYEAARKLKGANVGEILRDFA 499

  Fly   396 MVNYIPKLIHTIAPRIVKL-PYPASASSPASLSTEAYIRLEHDSEEEYALYFFRCRTDFLEIFRL 459
                      |:...:|:| |...|:::...::.|                 ..|:...|....|
  Fly   500 ----------TVCQAVVRLAPLMDSSTAAPGVADE-----------------MECQLQMLSDSLL 537

  Fly   460 ATLVQPLVTYGYCEQWLQQRLRNAQIEADAEVKSGNVSCSVLDPVYLEWDALVSVLDGVLSRILL 524
            .||                     |:.|...:.||.   |.:|....:.|     ||.:.:::||
  Fly   538 QTL---------------------QLLASNRLYSGG---SEMDKATFQTD-----LDNLYAQVLL 573

  Fly   525 VAERPSVPAGLRLLEECLKLETINPLTYSIL-LSCISALFVFL-SMSAC--QITATNCVAMSGVS 585
            .                  :.:|.|||.::. ...:..||..| |:.||  .:||.:.:.....|
  Fly   574 A------------------MRSIFPLTKAMSGEELLHRLFAILGSIFACNGSLTAASPIVQQAAS 620

  Fly   586 LLPRVLDKIFRALVMKPPNELEKVQAKS---------AKNLRRHAASLLVKLA------------ 629
            .|     .:|.:.|::|...|:..|.:|         |:..|:...::.:.|.            
  Fly   621 EL-----LLFISTVIRPKCLLDIPQIQSLLQAGSRLGAQLPRQVCINVHISLVSYMVLPWKSVPE 680

  Fly   630 --HKYPLLLLPVFEQINGHVELLL------------------------------KEPG---KHQL 659
              .:||..|..:.|.:.|..:..|                              |..|   |..|
  Fly   681 QQQEYPRRLWMLREYVQGLAQNFLDLDLGQANESKVAATTLSLLGTFTALIEYFKATGGNAKDML 745

  Fly   660 CRLMRTTLQEALILISNH----------FCDF------------------ERQTLFI-------- 688
            ....:..|.:||::.:|.          ..:|                  |..||||        
  Fly   746 ASTFKPILTKALMIFNNFGQSSIAMAITVAEFSLSMLRTLPTHLGAQFIKEMITLFISVSSREQL 810

  Fly   689 --------EHIVQDKRTEWLAFGDA----LKSPLDFMSFVGLDKPPIFAVEGAVTLQNRSRLLDA 741
                    |.|:|..:......|.|    |.|.|||.:...|   |:...:.|.|  :.|.:...
  Fly   811 TLSRLAVMEKILQMFKLIVEQPGSASLGLLPSILDFSTQQIL---PLLQQQNAAT--DNSEITSL 870

  Fly   742 LHVVLGVVKRCTW----PDDPERAQRGGFVIGCTELGNPICR---NPATKHIVPLLS-------- 791
            |:.:...|..|.|    .:.......||      ..||..|.   :||  |.:.:|:        
  Fly   871 LYALFDSVLTCKWQFFYKNQLSNGHSGG------GSGNFNCSDNLHPA--HFMAILNAYGQMLVS 927

  Fly   792 --------HVLSLMRVLNE--------LFAPEALQA--------LSEGYRGIH-----------G 821
                    .||..|:.:||        ||..:.|.:        |..|...:|           |
  Fly   928 GTDPSNVRSVLFSMQNVNERSRLYQRALFKEQLLASFQRALLNLLLSGEGSLHFDMIAQALYAMG 992

  Fly   822 MMEHEKKL--------------LMGICALPTDPLDTTIRSEPTAFEKMQTFMMMVTEGCYHLMGS 872
            .::..:.|              |..||  .|:.|...::..||..:|:.  .:|....|.||..:
  Fly   993 QVDRRQLLESFVHASLPVAQTSLEEIC--QTNVLPFIVQDIPTFTQKLT--QLMQDAHCVHLNET 1053

  Fly   873 A 873
            |
  Fly  1054 A 1054

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ranbp21NP_001285453.1 IBN_N 34..101 CDD:281761 18/71 (25%)
Xpo1 116..274 CDD:285575 39/200 (20%)
eboNP_001284739.1 IBN_N 30..98 CDD:281761 18/68 (26%)
Xpo1 110..259 CDD:285575 36/156 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5101
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.