DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ranbp21 and xpo5

DIOPT Version :9

Sequence 1:NP_001285453.1 Gene:Ranbp21 / 32970 FlyBaseID:FBgn0031051 Length:1241 Species:Drosophila melanogaster
Sequence 2:XP_031757462.1 Gene:xpo5 / 394717 XenbaseID:XB-GENE-5947328 Length:1245 Species:Xenopus tropicalis


Alignment Length:1254 Identity:412/1254 - (32%)
Similarity:682/1254 - (54%) Gaps:76/1254 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ALAAELASAIDLVMNPMTQQQARLEAYMACERFKEESPMCAQVGLFLASSPQSNQQVRHFGLQLI 73
            ||..:|..|:.:::.|.::|:.||||...||.|||.||:|...||.|::...| ..||||||.::
 Frog    45 ALCEQLVRAVTVMLEPESRQEYRLEALKFCEEFKERSPLCVPCGLQLSNRSHS-PCVRHFGLHVL 108

  Fly    74 EYTIKYRWNCITHEEKVYIKDNAIKMLNVGVGP-AEDRSLLPTKDALSRIIVEMIKREWPQQWSD 137
            |:.||:|||.::.||||.:||:.:.:::.|:.| .|:.|.:  ||.::||:|||.||||||.|.|
 Frog   109 EHVIKFRWNDMSREEKVCLKDSVMDLISHGMHPILEEESHI--KDMMARIVVEMAKREWPQHWPD 171

  Fly   138 LLPELSQACTKGEAQTELVLLVFLRLVEDVALLQTIESNQRRKDMYQALNNNMNDIFEFFLRLVE 202
            ||.||......||||||||:.:.|||.|||...|.:.: |||:|:...:...|:.:|.|.|.:::
 Frog   172 LLNELDSLTRVGEAQTELVMFILLRLAEDVVTFQNLPT-QRRRDIQTTMTQKMDVLFAFMLNILQ 235

  Fly   203 QHVTAFRE-TTRLCNYTKANAHSRVVEMVLLTLSGFVEWVSIQHIMSSNGKLMHFLCILLNDKAF 266
            |.|..::. .|...|..||....||....|.||:|:::||:|.|||:.|.||:..||:||::...
 Frog   236 QSVQQYQHLKTDPANSVKAQGMCRVAVASLKTLAGYIDWVAITHIMADNCKLLGMLCVLLSEPEL 300

  Fly   267 QCNAAECLAQITNRKGQTKERKPLLQLFNEEPLRYIYQASQIPADTSSTLAVEQHLNFLKKLLQV 331
            |..|||||....:|||:.::|.|||.||.:|.:.||...:|: ||| .||..:::: .||::.|:
 Frog   301 QLEAAECLLIAVSRKGKLEDRIPLLILFGDEAIEYILSVAQM-ADT-ETLEEKRYI-LLKRICQL 362

  Fly   332 LNGMAQQLVALWGKDD-ATQRPVHLEVLLECLLLLVQHPSLGLSHGSALIWQLLLKHEPSSKDFA 395
            :..:..|:.||....| ....|.:....||.||...:|.|..|:..:.|.|..:.:||..|:...
 Frog   363 ICTLGTQICALTQSPDLKVNVPGNFNKYLETLLSFTRHASQFLTSSTILTWGTIFRHEVLSRHPQ 427

  Fly   396 MVNYIPKLIHTIAPRIVKLPYPASASSPASLSTEAYIRLEHDSEEEYALYFFRCRTDFLEIFRLA 460
            ::..||..:.:....||::.:|:..:||:.    .|.|::::|:|::..:|...|.....:.|.|
 Frog   428 LLAAIPDFLRSSMVSIVRVGFPSKDNSPSC----KYSRMDYESDEDFNGFFNSFRALMGGVVRAA 488

  Fly   461 TLVQPLVTYGYCEQWLQQRLRNAQIEADAEVKSGNVSCSVLDPVYLEWDALVSVLDGVLSRILLV 525
            ..:.|...:...::|||.:|...........:.|:..||.....:|:|:|:....:.|.|::..|
 Frog   489 CYLDPHTGFCIAKEWLQFQLSAPLDPGPHNAQPGDALCSPTSTSFLQWEAMTFFCECVTSQLFRV 553

  Fly   526 AERPSVPA--GLRLLEECLKLETINPLTYSILLSCISALFVFLSMSACQITATNCVAMSGVSLLP 588
            ..:..:|.  |:.||::.|..||::||..|.:|:.:|:|..|::          |::    |.:|
 Frog   554 VPKEELPVAEGIGLLQQVLSYETMDPLILSFVLTNLSSLMPFIT----------CLS----SYVP 604

  Fly   589 RVLDKIFRALVMKPPNELEKVQAKSAKNLRRHAASLLVKLAHKYPLLLLPVFEQINGHVELLLKE 653
            .||.|:..|:......:::..:::...|:||||.|.|:|:...||.|:.|.|||::..|..||  
 Frog   605 PVLSKLLDAISFPLSGDMKVSKSRGEMNVRRHANSSLIKVCRDYPELVQPHFEQLHARVTALL-- 667

  Fly   654 PGKHQLCRLM-RTTLQEALILISNHFCDFERQTLFIEHIV-------QDKRTEWLAFGDALKSPL 710
             |:.||...| :..|.|||||.||.|..::||.:.:|.::       ..::|:     .|...|.
 Frog   668 -GEEQLLTQMGKCALMEALILASNQFKSYDRQQVLLEELIGPLVSGCVSEKTQ-----RAFSGPD 726

  Fly   711 DFMSFVGLDKPPIFAVEGAVTLQNRSRLLDALHVVLGVVKRCTWPDDPERAQRGGFVIGCTELGN 775
            :|:.|||.|.......|......:||:|......:||:|||..||.|||.|:.||||||.:..|.
 Frog   727 EFIYFVGADILMHQQEEEDRGAPSRSQLSLCTFALLGMVKRSQWPTDPEEAKAGGFVIGYSASGA 791

  Fly   776 PICRNPATKHIVPLLSHVLSLMRVLNELFAPEALQALSEGYRGIHGMMEHEKKLLMGI------- 833
            |:.|||..:.::.:|..:|:|:|.:|.|:.||.:..:.:.:.....|:..::|||||.       
 Frog   792 PLLRNPGARLLLKVLDSLLALIRTMNNLYLPEVMGKMGDTFCKSLNMLAMDRKLLMGTSQSAIED 856

  Fly   834 CALPTDPLDTTIRSEPTAFEKMQTFMMMVTEGCYHLMGSAGPSLGRDLYQLMGLSDAIVTNVFSR 898
            |.||.          .|...::|.|...:.:.|..::|..|||:..:.|.:..|:..::::||:.
 Frog   857 CDLPA----------KTNLSRIQFFFASLFDNCCQILGHCGPSMPHEFYSVPDLASRLLSSVFTN 911

  Fly   899 MDLVPDYRLRPIIRVFFKPFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRWIYI--ASLYESGQ 961
            .|.|||||||.|:||..||.:.|||...|:|::.|:...|...:.:||:::|:.|  .::.....
 Frog   912 ADNVPDYRLRLILRVLVKPLILSCPAEKYESLVCPILGPLIIYLYQRLSQKWLSINQRTVVSEED 976

  Fly   962 LDGEVNDTQEVLEDQLNRTLTREYLDVLKIALVGGQIGADHVAAGANANSNSVAMENEEHSMDSA 1026
            ...|.::.|||||:||.|.||||.:|::....:..: ..|..|:||:...::...:.:|..|.: 
 Frog   977 YTEEDSECQEVLEEQLVRQLTREVVDLIGSCCIARK-SNDFCASGADVGHSAGQADGDEEEMMT- 1039

  Fly  1027 PQSRAIQSALLSDIISDLGGKLLRNGLIGNYVLMTLLKAIAWNDGM-CSMKAVNIAAPVMRFLAA 1090
              :.|:....:.  :::||..||.|..|...:|:.....:.|.|.| |...|.::..|:::.:.:
 Frog  1040 --TEAVAPGPIE--LTELGQFLLANEEISTSLLVISFSPLVWKDTMACQKAASHLCWPLLKQVMS 1100

  Fly  1091 EKLMDENKAVTAFTAVLQGMQVHGQHEANQSGLVTLGVQFYELLRPQFPILSEVLQHIPSVNAAD 1155
            ...:..:.|:..|:.:|.|:|.|||||:.:..||.|..|.||.||||:|.|..:::.:|.|....
 Frog  1101 ASPLPADAALCVFSNILCGLQTHGQHESCKFPLVQLSFQTYEALRPQYPELRGLMEQVPDVPRDS 1165

  Fly  1156 IQKFDEKIAVAPVKGNKVDRAKKDIFKKLTAQLVGRSVNQLFRHEVQIANLPPMQSHKAKGSMGT 1220
            :::||.|:...|.|..  ::.:::.||||.|..:|:.:.:.||.||.|.|||.:...|.|.:  .
 Frog  1166 LEQFDAKLLAPPQKVG--EKKRREHFKKLIAGCIGKPLGEQFRKEVHIRNLPALFKKKTKSA--P 1226

  Fly  1221 TADIMDSNQNASLARLFGP 1239
            .:|.:.|:.::||..||.|
 Frog  1227 DSDSVLSSCDSSLVALFQP 1245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ranbp21NP_001285453.1 IBN_N 34..101 CDD:281761 31/66 (47%)
Xpo1 116..274 CDD:285575 71/158 (45%)
xpo5XP_031757462.1 CRM1 48..>383 CDD:227432 140/341 (41%)
Xpo1 146..308 CDD:400614 72/164 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 442 1.000 Domainoid score I536
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H69316
Inparanoid 1 1.050 655 1.000 Inparanoid score I774
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D203278at2759
OrthoFinder 1 1.000 - - FOG0003520
OrthoInspector 1 1.000 - - otm48142
Panther 1 1.100 - - LDO PTHR11223
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4056
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.160

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