DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ranbp21 and xpo5.2

DIOPT Version :9

Sequence 1:NP_001285453.1 Gene:Ranbp21 / 32970 FlyBaseID:FBgn0031051 Length:1241 Species:Drosophila melanogaster
Sequence 2:XP_031757698.1 Gene:xpo5.2 / 100487222 XenbaseID:XB-GENE-996403 Length:1190 Species:Xenopus tropicalis


Alignment Length:1272 Identity:360/1272 - (28%)
Similarity:606/1272 - (47%) Gaps:160/1272 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EALAAELASAIDLVMNPMTQQQARLEAYMACERFKEESPMCAQVGLFLASSPQSNQQVRHFGLQL 72
            |||..:|..::.::|.|.:.|:.||:|...||.|||.||:|...||.|::...| ..||||||.:
 Frog    12 EALCEQLVRSVSVIMEPESSQECRLKALKFCEEFKERSPLCVPCGLQLSNRSHS-PCVRHFGLHV 75

  Fly    73 IEYTIKYRWNCITHEEKVYIKDNAIKMLNVGVGP-AEDRSLLPTKDALSRIIVEMIKREWPQQWS 136
            :|:.||:|||.:...::|::|:..:.:::.|:.| .|::..:  ||.::|::||:||||||..|.
 Frog    76 LEHVIKFRWNVMPLGDRVFVKNRMMLLISYGIHPILEEKGHI--KDVIARVVVEIIKREWPWNWL 138

  Fly   137 DLLPELSQACTKGEAQTELVLLVFLRLVEDVALLQTIESNQRR-----KDMYQALNNNMNDIFEF 196
            .::.||:.....|:||.|||:.:.|||.||:...:|      |     |:::::|..||..|::|
 Frog   139 GMVNELAFTANFGDAQMELVMFILLRLAEDLGPFET------RPIWCLKELHKSLGANMGKIYDF 197

  Fly   197 FLRLVEQHVTAFRETTRLCNYTKAN---AHSRVVEMVLLTLSGFVEWVSIQHIMSSNGKLMHFLC 258
            .|.::::           |.....|   ...||....|.||:|:::.:..:.||:.|..|:..||
 Frog   198 ILIVLQR-----------CEQNHQNLTQGQFRVAAAALRTLAGYIKCLPTRLIMADNCTLLWLLC 251

  Fly   259 ILLNDKAFQCNAAECLAQITNRKG-QTKERKPLLQLFNEEPLRYIYQASQIPADTSSTLAVEQHL 322
            :|||....|..|||||....|:|| ..:||.|||.||.|:.||||..|:|: ||  |....|::.
 Frog   252 VLLNVPELQMEAAECLLLAVNKKGLLLEERVPLLILFREDALRYILTAAQL-AD--SDPLQERNY 313

  Fly   323 NFLKKLLQVLNGMAQQLVALWGKDDATQ-------RPVHLEVLLECLLLLVQHPSLGLSHGSALI 380
            ..||.:.|:|..:..||.||      ||       .|...:..||.||.|.:||||.|:..:.:|
 Frog   314 VILKMIGQILCDLGNQLCAL------TQVTAFEVKTPETFDRYLEALLSLTRHPSLFLTSSAFVI 372

  Fly   381 WQLLLKHEPSSKDFAMVNYIPKLIHTIAPRIVKLPYPASASSPASLSTEAYIRLEHDSEEEYALY 445
            |..|..|...|.|..:...||.::......|||:.||:..:||:.    .|.||:.|.:.|:..:
 Frog   373 WGTLFSHRVLSHDPQLTAAIPDVLRAAMVSIVKVGYPSMDNSPSC----EYSRLDFDDDTEFNTF 433

  Fly   446 F--FR----------CRTDFLEIFRLATLVQPLVTYGYCEQWLQQRLRNAQIEADAEVKSGNVSC 498
            |  ||          ||.|...:..:||            :|::.:|............|....|
 Frog   434 FLSFRKQMGIVVRSLCRLDTRTVLHVAT------------EWMRHQLSAPLDPGPHNATSVEALC 486

  Fly   499 SVLDPVYLEWDALVSVLDGVLSRIL--LVAERPSVPAGLRLLEECLKLETINPLTYSILLSCISA 561
            |...|.:|.|:|:......|.:::.  |.||...:..|:|||:..:..||.:||..|.:|:.:::
 Frog   487 SPHSPSFLHWEAMSFFCSEVFAQLCRPLSAEEALLREGVRLLQRVISYETKDPLIVSCVLTNLAS 551

  Fly   562 LFVFLSMSACQITATNCVAMSGVSLLPRVLDKIFRAL-------VMKPPNELEKVQAKSAKNLRR 619
            |...             :|.:| .|:|.||.|:..|.       |..|...|        :|:|.
 Frog   552 LLPL-------------IAHAG-HLMPLVLQKLLSAAGFADTDGVTVPRTVL--------RNIRS 594

  Fly   620 HAASLLVKLAHKYPLLLLPVFEQINGHVELLLKEPGKHQLCRLMRTTLQEALILISNHFCDFERQ 684
            .|.:||..:...:|.|:.|.||.::..::.||.:  :..|....|..|..||:|.||||.::.||
 Frog   595 CAGTLLQTVCVTFPDLVGPCFEVLHTRIKALLGQ--ERLLTGAERCALMGALVLASNHFKNYSRQ 657

  Fly   685 TLFIEHIVQDKRTEWLA--FGDALKSPLDFMSFVGLDKPPIFAVEGAVTLQ--------NRSRLL 739
            ...:|.:::...:..|:  ....|..|.:|:||  |:.|      |:...:        :.|:|.
 Frog   658 RSILEELLRPAVSMLLSEEMQRVLSGPREFISF--LNNP------GSENQEEGDDGGRLSYSKLC 714

  Fly   740 DALHVVLGVVKRCTWPDDPERAQRGGFVIGCTELGNPICRNPATKHIVPLLSHVLSLMRVLNELF 804
            .....:|..:::...|:....|..||||.|.|..| .:..||....::.:|..:|.|:|.:|.|:
 Frog   715 YCADTLLAAIRKSRRPNQFTEATAGGFVKGRTPNG-AVFLNPCAGELLKVLDRLLVLIRTMNSLY 778

  Fly   805 APEALQALSEGYRGIHGMMEHEKKLLMGICALPTDPLDTTIRSEP----TAFEKMQTFMMMVTEG 865
            .||.:..::|..  ....:|.|.|.:|. |:.|       |..|.    |..|::|.....:.:.
 Frog   779 LPEVMTKMAETV--CQSGLEVENKSIMD-CSQP-------IMGESVPPVTVPEQLQGPYNSLYKA 833

  Fly   866 CYHLMGSAGPSLGRDLYQLMGLSDAIVTNVFSRMDLVPDYRLRPIIRVFFKPFVYSCPPSFYDSV 930
            |..::|..|||:..:.|.:..|:..::::.|:.:|.|.|..||.|:.....|.::.||...|:||
 Frog   834 CCQILGKCGPSMPHEFYSVPDLASRLLSSAFTNLDYVSDLHLRHIVNDLVTPLLFYCPSKKYESV 898

  Fly   931 LVPLFAHLAPLMCERLTRRWIYIASLYESGQLDGEVNDTQEVLEDQLNRTLTREYLDVLKIALVG 995
            ::|:...|...:.:||:::|:.|.....|.:.| .:.:..|..:|.:.|.|:|..:..:.|.   
 Frog   899 VLPILRPLLMSLYQRLSQKWLCINQRTTSSEED-LLEEESESQDDLMVRLLSRTVVQFIYIC--- 959

  Fly   996 GQIGADHVAAGANANSNSVAMENEEHSMDSAPQSRAIQSALLSDIISDLGGKLLRNGLIGNYVLM 1060
              ..|......::|:...|....:..:.|....:..:...|.|..:|:||..||:|..:...:|:
 Frog   960 --CKATATIYHSDADGAFVPRVEQAGAEDQEALTAPVDHLLHSMKLSNLGQFLLKNEEVYTALLL 1022

  Fly  1061 TLLKAIAWNDGM-CSMKAVNIAAPVMRFLAAEKLMDENKAVTAFTAVLQGMQVHGQHEANQSGLV 1124
            ....::.|.|.. |:|.|..:...::..:.|..| ..:.||..|.:||.|:|.:|..::....||
 Frog  1023 MAYSSLMWKDPQTCNMAATRLCWSLLSQMMAVSL-PADAAVCYFASVLCGLQANGHCKSCTDPLV 1086

  Fly  1125 TLGVQFYELLRPQFPILSEVLQHIPSVNAADIQKFDEKIAVAPVKGNKVDRAKKDIFKKLTAQLV 1189
            .|..:||..|||::|.|..:::.:|......:.:|||.|.....|..|:    |:.|:.|....:
 Frog  1087 LLAFEFYVALRPKYPELRGLMERVPQTQRHVLVQFDEDIVSPKQKKKKL----KEQFRNLLTGCI 1147

  Fly  1190 GRSVNQLFRHEVQIANLPPMQSHKAKGSMGTTADIMD 1226
            |:.:...| ::|.|.:||       .|..||:..:::
 Frog  1148 GKPLADQF-YKVHIQHLP-------AGFKGTSGPVLE 1176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ranbp21NP_001285453.1 IBN_N 34..101 CDD:281761 27/66 (41%)
Xpo1 116..274 CDD:285575 55/165 (33%)
xpo5.2XP_031757698.1 CRM1 58..>376 CDD:227432 120/346 (35%)
Xpo1 116..267 CDD:400614 55/169 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D203278at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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