DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ranbp21 and LOC100486598

DIOPT Version :10

Sequence 1:NP_608339.2 Gene:Ranbp21 / 32970 FlyBaseID:FBgn0031051 Length:1241 Species:Drosophila melanogaster
Sequence 2:XP_031757696.1 Gene:LOC100486598 / 100486598 XenbaseID:XB-GENE-29078411 Length:1245 Species:Xenopus tropicalis


Alignment Length:1259 Identity:360/1259 - (28%)
Similarity:619/1259 - (49%) Gaps:125/1259 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LAAELASAIDLVMNPMTQQQARLEAYMACERFKEESPMCAQVGLFLASSPQSNQQVRHFGLQLIE 74
            |...|..|:.::|:|.:.|:.|.||:..||.|||.||:|...||.|::...| ..||||||.::|
 Frog    54 LCGRLVRALTVIMDPKSSQEGRQEAHKFCEEFKERSPLCVPCGLQLSNRSHS-PCVRHFGLHVLE 117

  Fly    75 YTIKYRWNCITHEEKVYIKDNAIKMLNVGVGP-AEDRSLLPTKDALSRIIVEMIKREWPQQWSDL 138
            :.||:|||.::.:::|::|::.:.:::.|:.| .|::..:  ||.::|::||:||||||..|.|:
 Frog   118 HVIKFRWNVMSVDDRVFVKNSVMLLISHGIHPILEEKGHI--KDVIARVVVEIIKREWPWNWPDM 180

  Fly   139 LPELSQACTKGEAQTELVLLVFLRLVEDVALLQTIESNQRRKDMYQALNNNMNDIFEFFLRLVEQ 203
            :.||:.....|:||.|||:.:.|||.|::..|:|....| .||:::.|..||:.||.|.:.::::
 Frog   181 VNELACLGNFGDAQMELVMFILLRLAEEIGPLETRPICQ-PKDLHELLKENMDKIFAFVVTILQR 244

  Fly   204 HVTAFRETTRLCNYTKANAHSRVVEMVLLTLSGFVEWVSIQHIMSSNGKLMHFLCILLNDKAFQC 268
            .|...:..|:        ...||....|.||:|:::.:..:.||:.|..|:..||:|||....|.
 Frog   245 CVPNCQNLTQ--------GQFRVAAAALRTLAGYIKCLPTRLIMADNCTLLWLLCVLLNVPELQM 301

  Fly   269 NAAECLAQITNRKG-QTKERKPLLQLFNEEPLRYIYQASQIPADTSSTLAVEQHLNFLKKLLQVL 332
            .|||||....|:|| ..:||.|||.||.|:.||||..|:|: ||  |....|::...||.:.|:|
 Frog   302 EAAECLLFAVNKKGLLLEERVPLLILFREDALRYILTAAQL-AD--SDPLQERNYVILKMIGQIL 363

  Fly   333 NGMAQQLVALWGKDDAT----QRPVHLEVLLECLLLLVQHPSLGLSHGSALIWQLLLKHEPSSKD 393
            ..:..||.|     ..|    :.|.:.:..||.||.|.:||||.|:..:|.:|..|..|...|.|
 Frog   364 CDLGNQLCA-----QVTAFEVKTPENFDRYLEALLSLTRHPSLFLTSLAAEVWGTLFNHRVLSHD 423

  Fly   394 FAMVNYIPKLIHTIAPRIVKLPYPASASSPASLSTEAYIRLEHDSEEEYALYF--FR-------- 448
            ..:...||.::......|||:.||:..:||:.    .|.|::.|.:.|:..:|  ||        
 Frog   424 PQLTAAIPDVLRAAMVSIVKVGYPSMDNSPSC----EYSRMDFDDDIEFNTFFLSFRKQMGIVVR 484

  Fly   449 --CRTDFLEIFRLATLVQPLVTYGYCEQWLQQRLRNAQIEADAEVKSGNVSCSVLDPVYLEWDAL 511
              ||.|...:..:||            :|::.:|............||...||...|.:|.|:|:
 Frog   485 SLCRLDTRTVLHVAT------------EWMRHQLSAPLDPGPHNATSGEALCSPHSPSFLHWEAM 537

  Fly   512 VSVLDGVLSRIL--LVAERPSVPAGLRLLEECLKLETINPLTYSILLSCISALFVFLSMSACQIT 574
            ......|.:.:.  |.||...:..|:.||::.:..||.:||..|.:|:.:|.|..|:        
 Frog   538 SFFCSEVFAPLCRPLSAEEVLLTQGVSLLQQVISYETKDPLIVSCVLTNLSTLLPFI-------- 594

  Fly   575 ATNCVAMSGVSLLPRVLDKIFRALVMKPPNELEKVQAKSAKNLRRHAASLLVKLAHKYPLLLLPV 639
                  ..|..|||.::.|:..|......:.: ||......|:|..|::||..:..::|.|:.|.
 Frog   595 ------RHGSDLLPLMVSKLLSAAGFADTDAV-KVPRTLLMNIRSCASALLQTICIRFPDLVGPH 652

  Fly   640 FEQINGHVELLLKEPGKHQ-LCRLMRTTLQEALILISNHFCDFERQTLFIEHIVQDKRTEWLA-- 701
            ||.::..::.||   |:.| |....|..|..||:|.||||.::.||...:|.::|...:..|:  
 Frog   653 FEVLHTRIKALL---GQEQLLADAERCALMGALVLASNHFKNYNRQRSILEELLQPAVSMLLSEE 714

  Fly   702 FGDALKSPLDFMSFVGLDKPPIFAVEGAVT--LQNRSRLLDALHVVLGVVKRCTWPDDPERAQRG 764
            ....|..|.:|:||:..:.|.....|..|.  ..:.|:|....:..|..:::...|...:.|:.|
 Frog   715 MQRVLSGPSEFISFLRANNPGSENQEEGVDGGRLSYSKLCYCAYTFLAAIRKSRRPIIFKEAKAG 779

  Fly   765 GFVIGCTELGNPICRNPATKHIVPLLSHVLSLMRVLNELFAPEALQALSE-----GYRGIHGMME 824
            |||.|||..|..:.:||....::.:|..:|.|:|.:|.|:.||.:..::|     ........:|
 Frog   780 GFVKGCTPDGVAMLQNPCAGELLKVLDRLLVLIRTMNSLYLPEVMTKMAETSLKMAETSQSCELE 844

  Fly   825 HEKKLLMGICALPTDPLDTTIRSEP----TAFEKMQTFMMMVTEGCYHLMGSAGPSLGRDLYQLM 885
            ...|.:|. |:.|       |..|.    |..|::|.....:.:.|..::|..|||:..:.|.:.
 Frog   845 MGNKSIMD-CSQP-------IMGESGPPVTMPEQLQGPYNSLYKACCQILGKCGPSMPHEFYSVP 901

  Fly   886 GLSDAIVTNVFSRMDLVPDYRLRPIIRVFFKPFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
            .|:..::::.|:.:|.|.|..||.|:.....|.::.||...|.||.:|:...|...:.:||:::|
 Frog   902 DLASRLLSSAFTNLDYVSDLHLRHIVIDLVTPLIFYCPSKKYQSVALPILGPLLMSLYQRLSQKW 966

  Fly   951 IYIASLYESGQLDGEVNDTQEVLEDQLNRTLTREYLDVLKIALVGGQIGADHVAAGANAN----- 1010
            :.|.....:.:.| .:.:..|..:|.:.|.|:|..:..:.|..:     |.|....::|:     
 Frog   967 LCINQRTTASEED-LLEEESESQDDLMVRLLSRTVVQFIYICCM-----ASHTTYQSDADYRIAP 1025

  Fly  1011 --SNSVAMENEEHSMDSAPQSRAIQSALLSDIISDLGGKLLRNGLIGNYVLMTLLKAIAWNDGM- 1072
              ..:.|.|.||:.:..|..::.::|..|    |.||..||.|..:...:|:....::.|.|.. 
 Frog  1026 RVEQAEADEEEENLILMAAAAKVLKSLAL----SKLGQFLLSNEEVYTALLLMAYSSLMWKDPQT 1086

  Fly  1073 CSMKAVNIAAPVMRFLAAEKLMDENKAVTAFTAVLQGMQVHGQHEANQSGLVTLGVQFYELLRPQ 1137
            |:|.|..:...::..:.|..| ..:.||..|.:||.|:|.:|..::....||.|..:||..|||:
 Frog  1087 CNMAATRLCWSLLSQMMAVSL-PADAAVCYFASVLGGLQANGHCKSCTDPLVRLAFRFYVALRPK 1150

  Fly  1138 FPILSEVLQHIPSVNAADIQKFDEKIAVAPVKGNKVDRAKKDIFKKLTAQLVGRSVNQLFRHEVQ 1202
            :|.|..:::.:|::....:::||:.:....::.|  :|..::.|.||.:....:.:...| ::|.
 Frog  1151 YPELHGLMEQVPNIQRDTLERFDKNLLSPDLEIN--ERMCREQFAKLLSGCTEKPLADQF-YKVH 1212

  Fly  1203 IANLPPMQSHKAKGSMGTTADIMD 1226
            |.:||       .|..||:..:::
 Frog  1213 IQHLP-------AGFKGTSGPVLE 1229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ranbp21NP_608339.2 IBN_N 34..101 CDD:397745 27/66 (41%)
Xpo1 116..274 CDD:462459 57/157 (36%)
Exportin-5 319..1196 CDD:437105 235/916 (26%)
LOC100486598XP_031757696.1 IBN_N 78..145 CDD:197981 27/67 (40%)
Xpo1 156..307 CDD:462459 57/161 (35%)
Exportin-5 350..1208 CDD:437105 235/917 (26%)

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