DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and ARP1

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_011997.1 Gene:ARP1 / 856530 SGDID:S000001171 Length:384 Species:Saccharomyces cerevisiae


Alignment Length:402 Identity:99/402 - (24%)
Similarity:167/402 - (41%) Gaps:76/402 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PIVLDIGTAYTKLGFAAEAYPR-------------KIMPTEVVMTTT----------GIRKRLF- 53
            |:|:|.|:...|.||:.|..|:             |:| .|.:...|          |:.|..: 
Yeast    14 PVVIDNGSGIIKAGFSGEERPKALEYCLVGNTKYDKVM-LEGLQGDTFIGNNAQKLRGLLKLRYP 77

  Fly    54 -------DYDTPEELYDQLV-DFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHF 110
                   |:|:.|.::..:: :.||       |.:..|...::.|........||.:|:|||..|
Yeast    78 IKHGVVEDWDSMELIWSYVLNEVLQ-------LQNIGEHPLLITEAPMNPLKNREQMAQVLFETF 135

  Fly   111 DVSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQ 175
            |||::......:::|......|..|||.|....|.:|::.|..:.|:......||:.|..:::.|
Yeast   136 DVSALYVSNPAVLSLYASGRTTGCVVDCGEGYCSTVPIYDGFALPASMMRMDIGGADITEQLQFQ 200

  Fly   176 LVES-GVKESLLTES---VLEDIKVRTCF----VTTMERAKARANGDENQPTPAPDVDYIVSDND 232
            |.:| ||  ||.:.|   ::..:|.:.|:    :...|....:...|.......||...|...||
Yeast   201 LRKSAGV--SLFSSSEREIVRTMKEKVCYLAKNIKKEEEKYLQGTQDLISTFKLPDGRCIEVGND 263

  Fly   233 AVIQVPGLLRESAYEIMFE---ASNERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGL 294
                     |..|.||:|.   .....|.|..:.::||....||:|:.|:.|:.|.||.:.::|.
Yeast   264 ---------RYRAPEILFSPQIIGLGYDGLSDMCMQSIWKVDLDLRKPLLSSIILSGGTTTLKGF 319

  Fly   295 LARLRQELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETYL 359
            ..|:..:|:.|.          .|..:.|.. |..::.:|.|:||::.......|.....|..:|
Yeast   320 GDRMLWDLEALT----------KGTSKIKII-APSERKYTTWIGGSILTGLSTFQRLWTKKSDWL 373

  Fly   360 K-SEHVPDWSNL 370
            : |..|  :|||
Yeast   374 EDSTRV--YSNL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 90/369 (24%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 96/397 (24%)
ARP1NP_011997.1 ACTIN 12..384 CDD:214592 99/402 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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