DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and ARP3

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_012599.3 Gene:ARP3 / 853528 SGDID:S000003826 Length:449 Species:Saccharomyces cerevisiae


Alignment Length:447 Identity:99/447 - (22%)
Similarity:163/447 - (36%) Gaps:107/447 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PPIVLDIGTAYTKLGFAAEAYPRKIMPTEVVMTTTGIRKRLFDYDTPE----------------- 59
            |.:|:|.||..||||||....|..:.||.:........|:......|.                 
Yeast     7 PAVVMDNGTGLTKLGFAGNDSPSWVFPTAIATAAPSNTKKSSGVGAPSAVSNEASYFGNSTSATN 71

  Fly    60 --------------------------------------------------ELYDQLVDFLQTIFF 74
                                                              |.:|.:..|.:...|
Yeast    72 FNGATGGLLSNNLSGKRGTEDLDFYIGNEALVASQGPSYSLSYPIRHGQVENWDHMERFWENSIF 136

  Fly    75 KHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDVSSVLFVPVHLIALS--------TLAVP 131
            |:|...|::..|:|.|........||.:|.:.|..|:.:.:......::||:        |....
Yeast   137 KYLRTEPEDHFFLLTEPPLNPPENREQVAEIFFESFNCAGLYIAVQAVLALAASWTSSKVTDRSL 201

  Fly   132 TALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLVESGVKESLLTESVLEDIKV 196
            |..|:|.|...|.|:||..|..|.:|.|:....|..|...|:..|.|.|..::.|..:  |.||.
Yeast   202 TGTVIDSGDGVTHVIPVAEGYVIGSAIKNIPIAGRDITLFIQSLLRERGEADTSLRTA--EKIKQ 264

  Fly   197 RTCFVTTMERAKARANGDENQPTPAPDVDYIVSDND----AVIQVPGLLRESAYEIMFE----AS 253
            ..|:|.. :..|.....|::   |:....::|.:.:    .|:.: |..|..|.||.|.    :|
Yeast   265 EYCYVCP-DIVKEFNKFDKD---PSKFAQFVVENQEKTRRKVVDI-GYERFLAPEIFFNPEIASS 324

  Fly   254 NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQELQHLLTEDPFYAERFHG 318
            :....||.::.::|..|.:|||:.|..::.|.||.:|.:....||:::|:.::......:|...|
Yeast   325 DFLTPLPTVVDQTIQACPIDVRKGLYNNIVLSGGSTMFKDFGRRLQRDLKSIVNNRIAQSELLSG 389

  Fly   319 ELQFKFFNAVG---------KQNFTAWLGGALCGATDLIQTRSLVKETYLKSEHVPD 366
            .      .:.|         ||....|.||:|...|...:.....|:.|  .|:.|:
Yeast   390 T------KSTGVDVSVISHRKQRNAVWFGGSLLAQTAEFKGYCHTKKDY--EEYGPE 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 92/419 (22%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 99/447 (22%)
ARP3NP_012599.3 COG5277 1..445 CDD:227602 99/447 (22%)
PTZ00280 5..446 CDD:240343 99/447 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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