DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and ACT1

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_116614.1 Gene:ACT1 / 850504 SGDID:S000001855 Length:375 Species:Saccharomyces cerevisiae


Alignment Length:390 Identity:87/390 - (22%)
Similarity:161/390 - (41%) Gaps:66/390 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EKPPIVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTGIR----------KR------ 51
            |...:|:|.|:...|.|||.:..||.:.|:.|       :|...|.:          ||      
Yeast     4 EVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLR 68

  Fly    52 -------LFDYDTPEELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVH 109
                   :.::|..|:::..       .|:..|.|:|:|...:|.|........||.:.:::|..
Yeast    69 YPIEHGIVTNWDDMEKIWHH-------TFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFET 126

  Fly   110 FDVSSVLFVPVH-LIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIK 173
            |:|.: .:|.:. :::|.:....|.:|:|.|...|.|:|:::|..:..|.......|..:...:.
Yeast   127 FNVPA-FYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLM 190

  Fly   174 RQLVESGVKESLLTE-SVLEDIKVRTCFVT---TMERAKARANGDENQPTPAPDVDYIVSDNDAV 234
            :.|.|.|...|...| .::.|||.:.|:|.   ..|...|..:....:....||...|...|:  
Yeast   191 KILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQVITIGNE-- 253

  Fly   235 IQVPGLLRESAYEIMFEAS---NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLA 296
                   |..|.|.:|..|   .|...:......||:.|.:|||:.|..::.:.||.:|..|:..
Yeast   254 -------RFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFPGIAE 311

  Fly   297 RLRQELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETYLKS 361
            |:::|:..|..          ..::.|.. |..::.::.|:||::..:....|...:.|:.|.:|
Yeast   312 RMQKEITALAP----------SSMKVKII-APPERKYSVWIGGSILASLTTFQQMWISKQEYDES 365

  Fly   362  361
            Yeast   366  365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 81/366 (22%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 86/388 (22%)
ACT1NP_116614.1 NBD_sugar-kinase_HSP70_actin 1..375 CDD:418402 87/390 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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