DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp10 and ACTRT3

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_115876.3 Gene:ACTRT3 / 84517 HGNCID:24022 Length:372 Species:Homo sapiens


Alignment Length:376 Identity:79/376 - (21%)
Similarity:135/376 - (35%) Gaps:71/376 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PIVLDIGTAYTKLGFAAEAYPRKIMPTEVVMTTTG-------------------IRKRLF-DYDT 57
            |:|:|.|:...|.|.|....|:.|.| .::....|                   .|..|| .|..
Human     7 PVVIDNGSGMIKAGVAGCREPQFIYP-NIIGRAKGQSRAAQGGLELCVGDQAQDWRSSLFISYPV 70

  Fly    58 PEELYDQLVDFLQTIFFKH-----LLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDVSSVLF 117
            ...|.....|  ..|.:||     |.:.|.:...::.|........|:.:..:.|.|..|.:...
Human    71 ERGLITSWED--MEIMWKHIYDYNLKLKPCDGPVLITEPALNPLANRQQITEMFFEHLGVPAFYM 133

  Fly   118 VPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLVESGVK 182
            ....::||......|.||::.|...|..:|:|.|..:....:.....|..:...:...:...|: 
Human   134 SIQAVLALFAAGFTTGLVLNSGAGVTQSVPIFEGYCLPHGVQQLDLAGLDLTNYLMVLMKNHGI- 197

  Fly   183 ESLLTES---VLEDIKVRTCFVTTMERAKARANGDENQPTPAPDV---DYIVSDNDAVIQVPGLL 241
             .||:.|   ::||||...|:|         |...|.:....||.   .|.:.|. .|||:...|
Human   198 -MLLSASDRKIVEDIKESFCYV---------AMNYEEEMAKKPDCLEKVYQLPDG-KVIQLHDQL 251

  Fly   242 RESAYEIMFEASN---ERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQELQ 303
             .|..|.:|...:   |...:..:...||:.|...:|.:...::.|.||.:...||..||.:::.
Human   252 -FSCPEALFSPCHMNLEAPGIDKICFSSIMKCDTGLRNSFFSNIILAGGSTSFPGLDKRLVKDIA 315

  Fly   304 HLLTEDPFYAERFHGELQFKFFNAV-----GKQNFTAWLGGALCGATDLIQ 349
            .:...:                .||     .::..:.|:||::..:....|
Human   316 KVAPAN----------------TAVQVIAPPERKISVWMGGSILASLSAFQ 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 78/375 (21%)
ACTRT3NP_115876.3 ASKHA_NBD_actin_Arp-T1-3 7..363 CDD:466848 79/376 (21%)

Return to query results.
Submit another query.