DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Actl6b

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_006504698.1 Gene:Actl6b / 83766 MGIID:1933548 Length:434 Species:Mus musculus


Alignment Length:434 Identity:82/434 - (18%)
Similarity:156/434 - (35%) Gaps:115/434 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IVLDIGTAYTKLGFAAEAYPRKIMPTEVVMTTT----GI--------RKRLFDYDT-----PEE- 60
            :|.|||:...:.|:|.|..|:...||.|.:...    |:        :.::|..||     |.: 
Mouse    14 LVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDG 78

  Fly    61 ------LYDQLVD-------FLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDV 112
                  |.:.:::       .|...:.||:...|.....::.|..:.:...||.|..::|..:::
Mouse    79 AEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNI 143

  Fly   113 SSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLV 177
            .:.......::........|.||:|.|.:.|:.:||..|..:..........|..|..:.:....
Mouse   144 PAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQ 208

  Fly   178 ESGV------------------------KESL----------LTESVLEDIKVRTCFVTTMERAK 208
            |..:                        ||.|          :...|::|.:.....|:.     
Mouse   209 EMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSD----- 268

  Fly   209 ARANGDENQPTPAPDVDYIVSDNDAVIQVP-------GLLRESAYEIMFEASNERD-------SL 259
              :..||......|.|.|         ::|       |..|....|.:|:.||.:.       .:
Mouse   269 --SPYDEQVAAQMPTVHY---------EMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGV 322

  Fly   260 PHLILRSILDCTLDVR--------RALVESVFLVGGGSMVQGLLARLRQELQHLLTEDPFYAERF 316
            .|::..||..|.:|:|        :.|..||.:.||.:::||...||.:||          :::.
Mouse   323 GHVVTTSIGMCDIDIRPVDASPCSQGLYGSVIVTGGNTLLQGFTDRLNREL----------SQKT 377

  Fly   317 HGELQFKFF--NAVGKQNFTAWLGGALCGATDLIQTRSLVKETY 358
            ...::.|..  |:..::.|:.|:||::..:....|...:.|:.|
Mouse   378 PPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEY 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 78/414 (19%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 82/434 (19%)
Actl6bXP_006504698.1 Actin 11..434 CDD:306521 82/434 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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