DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and ACT4

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_200745.1 Gene:ACT4 / 836056 AraportID:AT5G59370 Length:377 Species:Arabidopsis thaliana


Alignment Length:381 Identity:78/381 - (20%)
Similarity:153/381 - (40%) Gaps:54/381 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PIVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTG-----------IRKRLFDYDTPE 59
            |:|.|.||...|.|||.:..||.:.|:.|       ||...|           .::.:.....|.
plant     9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPI 73

  Fly    60 E-----LYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDVSSVLFVP 119
            |     .:|.:.......|:..|.|:|:|...:|.|........||.:.:::|..|:..::....
plant    74 EHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 138

  Fly   120 VHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLVESGVKES 184
            ..:::|......|.:|:|.|...:..:|::.|..:..|.......|..:...:.:.|.|.|...:
plant   139 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFT 203

  Fly   185 LLTE-SVLEDIKVRTCFVT-----TMERAKARANGDENQPTPAPDVDYIVSDNDAVIQVPGLLRE 243
            ...| .::.|:|.:..::.     .:|.:|..::.:::...|           |..:...|..|.
plant   204 TTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEKSFELP-----------DGQVITIGAERF 257

  Fly   244 SAYEIMFEAS---NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQELQHL 305
            ...|::|:.|   .|...:......||:.|.:|:|:.|..::.|.||.:|..|:..|:.:|:..|
plant   258 RCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITAL 322

  Fly   306 LTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETYLKS 361
            ..          ..::.|.. |..::.::.|:||::..:....|...:.|..|.:|
plant   323 AP----------SSMKIKVV-APPERKYSVWIGGSILASLSTFQQMWIAKAEYDES 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 77/380 (20%)
ACT4NP_200745.1 ASKHA_NBD_actin 8..372 CDD:466823 78/381 (20%)

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