DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and ARP8

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_568836.2 Gene:ARP8 / 835717 AraportID:AT5G56180 Length:471 Species:Arabidopsis thaliana


Alignment Length:334 Identity:78/334 - (23%)
Similarity:136/334 - (40%) Gaps:66/334 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPIYESVMQEKPPIVLDIGTAYTKLGFAAEAYPRKIMPTEVVMTTTGIRKRLFDYDTPEE-LYDQ 64
            |.||....|....|::|.|:.|.|.|::..|.|            :|......::...|. :|.:
plant   123 MHIYSQRAQVPGSIIIDGGSGYCKFGWSKYASP------------SGRSATFLEFGNIESPIYAR 175

  Fly    65 LVDFLQTIFFKHLLVSPKERKFVL------VENVFGSTVLRETLARVLF-VHFD--VSSVLFVPV 120
            |..|..|||.: :.|.|..:..|:      .::...:...|..|...:| |.||  |.:|..|..
plant   176 LQQFFATIFTR-MQVKPSMQPIVVSLPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQ 239

  Fly   121 HLIALSTLAVPTALVVDVGYSETSVMPVFSG-VQIMAAFKDQSYGGSAIHAEIKRQLVESGVK-E 183
            .::||......:.:||::|:...:::|:..| |......:...:|...:...:|.::.|:.:. :
plant   240 AVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQ 304

  Fly   184 SLLTESVLEDIKVRTCFVTTMERAKARANGDENQPTPAPDVDY---IVSDNDAVIQVPG-----L 240
            ||.|   :..:|.:.|:|.                     :||   :..|..|.::|.|     |
plant   305 SLYT---VRTLKEKLCYVA---------------------LDYKAELSKDTQASVEVSGEGWFTL 345

  Fly   241 LRE--SAYEIMFE---ASNERDSLPHLILRSILDCT---LDVRRALVESVFLVGGGSMVQGLLAR 297
            .:|  ...||:|:   |.....||...:...:..|.   |....:..::|.|.||.:.:.||..|
plant   346 SKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSER 410

  Fly   298 LRQELQ-HL 305
            |.:||| ||
plant   411 LERELQDHL 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 74/321 (23%)
ARP8NP_568836.2 F-box_AtARP8-like 42..86 CDD:438927
ASKHA_NBD_AtArp8-like 136..467 CDD:466847 74/321 (23%)
Blue background indicates that the domain is not in the aligned region.

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