DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp10 and ACT7

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_196543.1 Gene:ACT7 / 830841 AraportID:AT5G09810 Length:377 Species:Arabidopsis thaliana


Alignment Length:388 Identity:84/388 - (21%)
Similarity:158/388 - (40%) Gaps:68/388 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PIVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTGIR----------KR--------- 51
            |:|.|.||...|.|||.:..||.:.|:.|       ||...|.:          ||         
plant     9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPI 73

  Fly    52 ----LFDYDTPEELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDV 112
                :.::|..|:::..       .|:..|.|:|:|...:|.|........||.:.:::|..|:|
plant    74 EHGIVSNWDDMEKIWHH-------TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNV 131

  Fly   113 SSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLV 177
            .::......:::|......|.:|:|.|...:..:|::.|..:..|.......|..:...:.:.|.
plant   132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILT 196

  Fly   178 ESGVKESLLTE-SVLEDIKVRTCFVT-----TMERAKARANGDENQPTPAPDVDYIVSDNDAVIQ 236
            |.|...:...| .::.|||.:..:|.     .:|.||:.::.::|...|           |..:.
plant   197 ERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELP-----------DGQVI 250

  Fly   237 VPGLLRESAYEIMFEAS---NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARL 298
            ..|..|....|::|:.|   .|...:......||:.|.:|:|:.|..::.|.||.:|..|:..|:
plant   251 TIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRM 315

  Fly   299 RQELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETYLKS 361
            .:|:..|..          ..::.|.. |..::.::.|:||::..:....|...:.|..|.:|
plant   316 SKEITALAP----------SSMKIKVV-APPERKYSVWIGGSILASLSTFQQMWISKSEYDES 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 83/387 (21%)
ACT7NP_196543.1 ASKHA_NBD_actin 8..372 CDD:466823 84/388 (22%)

Return to query results.
Submit another query.