DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Actrt3

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_083966.1 Gene:Actrt3 / 76652 MGIID:1923902 Length:369 Species:Mus musculus


Alignment Length:377 Identity:78/377 - (20%)
Similarity:139/377 - (36%) Gaps:72/377 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KPPIVLDIGTAYTKLGFAAEAYPRKIMPT--------------EVVMTTTGIRKRLF---DYDTP 58
            :||:|:|.|:...|.|.|....|:.:.|.              |:.:......:|.|   .|...
Mouse     5 QPPVVIDNGSGMIKAGLAGTREPQFVYPNILGRSKGHTADSRQELCVGDQAQERRSFLSISYPVE 69

  Fly    59 EELYDQLVDFLQTIFFKH-----LLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDVSSVLFV 118
            ..|.....|  ..|.:||     |.::..:...::.|........|:.::.|.|.:..|.:....
Mouse    70 RGLISSWGD--MEIMWKHIYDYNLNLNASDGPVLVTEPALNPLADRQHISEVFFENLGVPAFYMS 132

  Fly   119 PVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLVESGVKE 183
            ...::||......|.||::.|...|..:|:|.|..:....|..:..||.:.:.:...|...|:  
Mouse   133 AQAVLALFAAGFTTGLVLNSGAGITQCVPIFEGYCLSHGVKQLNVAGSDLTSYLMMLLKGDGI-- 195

  Fly   184 SLL---TESVLEDIKVRTCFVTTMERAKARANGDENQPTPAPDVD--YIVSDNDAV------IQV 237
            .||   ...|:.|||...|:|         |...|::.|...:::  |.:.|...|      ...
Mouse   196 MLLRTGDRKVVTDIKENACYV---------AMNYEDEMTKDSNLEKIYTLPDGKTVKLHKQLFHC 251

  Fly   238 PGLLRESAYEIMFEASNERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQEL 302
            |..| .|.|.:..:|    ..:..:...||:.|..|:|.:...::.|.||.:...||..||.:::
Mouse   252 PEAL-FSPYLVNVDA----PGIDKMCFGSIMKCDTDLRNSFFSNIILSGGSTSFPGLDKRLIKDV 311

  Fly   303 QHLLTEDPFYAERFHGELQFKFFNAV-----GKQNFTAWLGGALCGATDLIQ 349
            ..|...:                .||     .::..:.|:||::..:....|
Mouse   312 AKLAPAN----------------TAVQVIAPPERKISVWMGGSILASLSAFQ 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 76/366 (21%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 78/376 (21%)
Actrt3NP_083966.1 ACTIN 5..369 CDD:214592 78/377 (21%)
NBD_sugar-kinase_HSP70_actin 9..369 CDD:302596 76/373 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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