DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Actr2

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001349828.1 Gene:Actr2 / 66713 MGIID:1913963 Length:399 Species:Mus musculus


Alignment Length:405 Identity:93/405 - (22%)
Similarity:157/405 - (38%) Gaps:80/405 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QEKPPIVLDIGTAYTKLGFAAEAYPRKIMPT----EVVMTTTGI------RKRLFDYDTPEELYD 63
            |.:..:|.|.||.:.|.|:|...:|..|.|.    .::.:||.:      ..:..|....:|. .
Mouse     4 QGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKNNKKMDLMVGDEA-S 67

  Fly    64 QLVDFLQTIF------------FKHLL----------VSPKERKFVLVENVFGSTVLRETLARVL 106
            :|...|:..:            .|||.          :..:..|.:|.|.....|..||.:..|:
Mouse    68 ELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVM 132

  Fly   107 FVHFDVSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAE 171
            |..:..|.|......::.|....:.|.:|||.|...|.:.||:.|..:....:.....|..|...
Mouse   133 FETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRY 197

  Fly   172 IKRQLVESG--VKESLLTESVLEDIKVRTCFV-TTMERAKARANGDENQPTPAPDVDYIVSDNDA 233
            :.:.|:..|  ...|...|:| ..||.:.|:| ..:|:.:..|     ..|......|.:.|. .
Mouse   198 LIKLLLLRGYAFNHSADFETV-RMIKEKLCYVGYNIEQEQKLA-----LETTVLVESYTLPDG-R 255

  Fly   234 VIQVPGLLRESAYEIMFEASNERDSLPHLI-----------LRSILDCTLDVRRALVESVFLVGG 287
            :|:|.| .|..|.|.:|:        ||||           ..:|....:|.|....:.:.|.||
Mouse   256 IIKVGG-ERFEAPEALFQ--------PHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGG 311

  Fly   288 GSMVQGLLARLRQELQHLLTEDPFYAER-FHGELQ----FKF-FNAVGKQNFTAWLGGALCGATD 346
            .:|..||.:||.:||:.|      |.|| ..|:::    ||. .....::....:||||:  ..|
Mouse   312 STMYPGLPSRLERELKQL------YLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAV--LAD 368

  Fly   347 LIQTRS---LVKETY 358
            :::.:.   :.::.|
Mouse   369 IMKDKDNFWMTRQEY 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 88/380 (23%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 92/402 (23%)
Actr2NP_001349828.1 ACTIN 6..393 CDD:214592 92/403 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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