DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp10 and ACTR3C

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_047276704.1 Gene:ACTR3C / 653857 HGNCID:37282 Length:280 Species:Homo sapiens


Alignment Length:257 Identity:64/257 - (24%)
Similarity:95/257 - (36%) Gaps:76/257 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 LFVHFDVSSVLFVPVHLIALS-----------TLAVPTALVVDVGYSETSVMPVFSGVQIMAAFK 159
            :|..|:|..:......::||:           ||   |.:|:|.|...|.|:||..|..|.:..|
Human     1 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTL---TGIVIDSGDGVTHVIPVAEGYVIGSCIK 62

  Fly   160 DQSYGGSAIHAEIKRQLVESGV----KESLLTESVLEDIKVRTCFV---TTMERAKARANGDENQ 217
            .....|..|...|::.|.|..|    ::||.|...   ||.:.|::   ...|.||.        
Human    63 HIPIAGRDITYFIQQLLREREVGIPPEQSLETAKA---IKEKYCYICPDIVKEFAKY-------- 116

  Fly   218 PTPAPDVD-----------YIVSDNDAVIQVPGLLRESAYEIMF--EASN--ERDSLPHLILRSI 267
                 |||           ..::....||.| |..|....||.|  |.:|  ..:|:..::...|
Human   117 -----DVDPQKWIKQYTGINAINQKKFVIDV-GYERFLGPEIFFHPEFANPDSMESISDVVDEVI 175

  Fly   268 LDCTLDVRRALVESVFLV-----------GGGSMVQGLLARLRQELQHLLTEDPFYAERFHG 318
            .:|.:||||.|.:.:.::           |.||.            |:||...|....||.|
Human   176 QNCPIDVRRPLYKVLGVLPGRYRDHPMRYGSGSW------------QNLLCHLPTIPGRFGG 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 64/257 (25%)
ACTR3CXP_047276704.1 ASKHA_ATPase-like <1..>188 CDD:483947 54/206 (26%)

Return to query results.
Submit another query.