DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and ACTR3B

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_065178.1 Gene:ACTR3B / 57180 HGNCID:17256 Length:418 Species:Homo sapiens


Alignment Length:440 Identity:100/440 - (22%)
Similarity:174/440 - (39%) Gaps:109/440 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PPIVLDIGTAYTKLGFAAEAYPRKIMPT-----EVVMTTTGIRKRL------FDY-------DTP 58
            ||.|:|.||.|||||:|....|:.|:|:     |........::|:      .|:       |.|
Human     6 PPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAIDKP 70

  Fly    59 E------------ELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFD 111
            .            |.:|.:..|::.:.||:|...|::..|::.|....:...||.||.::|..|:
Human    71 TYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFN 135

  Fly   112 VSSVLFVPVHLIALS-----------TLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGG 165
            |..:......::||:           ||   |.:|:|.|...|.|:||..|..|.:..|.....|
Human   136 VPGLYIAVQAVLALAASWTSRQVGERTL---TGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAG 197

  Fly   166 SAIHAEIKRQLVESGV----KESLLTESVLEDIKVRTCFVTTMERAKARANGDENQPTPAPDV-- 224
            ..|...|::.|.|..|    ::||.|...   ||.:.|::                   .||:  
Human   198 RDITYFIQQLLREREVGIPPEQSLETAKA---IKEKYCYI-------------------CPDIVK 240

  Fly   225 ---DYIVSDNDAVIQVPGLLRESAYEIMFEASNER------------------DSLPHLILRSIL 268
               .|.|.....:.|..|:...:..:.:.:...||                  :|:..::...|.
Human   241 EFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVIQ 305

  Fly   269 DCTLDVRRALVESVFLVGGGSMVQGLLARLRQELQHLLTEDPFYAERFHG--------ELQFKFF 325
            :|.:||||.|.::|.|.||.:|.:....||:::|:.::......:|...|        |:|....
Human   306 NCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTH 370

  Fly   326 NAVGKQNFTAWLGGALCGATDLIQTRSLVKETYLKSEHVPDWSNLCDNRP 375
            :   .|.:..|.||::     |..|....:..:.|.::.....::|.:.|
Human   371 H---MQRYAVWFGGSM-----LASTPEFFQVCHTKKDYEEYGPSICRHNP 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 94/403 (23%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 98/430 (23%)
ACTR3BNP_065178.1 PTZ00280 2..417 CDD:240343 100/440 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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