DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and si:ch211-241j12.3

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_017207998.2 Gene:si:ch211-241j12.3 / 566552 ZFINID:ZDB-GENE-040724-72 Length:1245 Species:Danio rerio


Alignment Length:360 Identity:95/360 - (26%)
Similarity:160/360 - (44%) Gaps:53/360 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KPPIVLDIGTAYTKLGFAAEAYPRKIMPT-------EVVMTTTGIRKRLFDYDTPE--------- 59
            |.|||||.|:...|.|||.:..|..:.||       |.||.:...|:....:|...         
Zfish   878 KTPIVLDSGSGLMKAGFADQDLPAAVFPTVIGRPKYEEVMNSCVDRELYVGHDAQHMRGVLTLRY 942

  Fly    60 -------ELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDVSSVLF 117
                   ..:|:: :.|.|..|:.|..:|::...:|.|........|:.:..::|..|.| .:.|
Zfish   943 PIRHGVVSNWDEM-EMLWTHAFQLLSAAPEDHPVLLTEAALNPLQNRQRMVELMFEAFSV-PLTF 1005

  Fly   118 VPVH-LIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLVESGV 181
            |.|. ::||......|.:|:|.|...:..:|||.|..:..|.:.....|:.:..::::.|:||||
Zfish  1006 VAVQAVLALYASGRTTGVVLDSGDGVSHSVPVFEGYCLPHAVQRLDLAGADVTLQLQKLLLESGV 1070

  Fly   182 KESLLTESVLE---DIKVRTCFVTTMERAKARANGDENQPTPAPDVDYIVSDNDAVIQVPGLLRE 243
              .|.|.:.||   ::|.|.|||:....|:.:::..|        :.|.:.|...|.......| 
Zfish  1071 --CLRTSAELEIVREMKERCCFVSVDYEAEMKSSESE--------IQYTLPDGHTVPLASQRFR- 1124

  Fly   244 SAYEIMFE---ASNERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQELQHL 305
             |.||:|.   ...:...|...:.||||...||:||:.|.::.|.||.:::.||..||:.|::.:
Zfish  1125 -APEILFRPELIGRDHYGLHESVFRSILQSDLDLRRSFVGNILLSGGNTLLSGLAERLQLEVRAM 1188

  Fly   306 LTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGA 340
            :..|.....|         .::...::|:.|.|||
Zfish  1189 VPLDLSACVR---------VSSPPDRDFSVWSGGA 1214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 93/358 (26%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 94/359 (26%)
si:ch211-241j12.3XP_017207998.2 Neuromodulin_N <411..625 CDD:331332
ACTIN 878..1245 CDD:214592 95/360 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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