DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and actl6b

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_005170633.1 Gene:actl6b / 553775 ZFINID:ZDB-GENE-050522-191 Length:426 Species:Danio rerio


Alignment Length:426 Identity:83/426 - (19%)
Similarity:154/426 - (36%) Gaps:107/426 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IVLDIGTAYTKLGFAAEAYPRKIMPTEVVMTT-------TGIRK-----RLFDYDTPE------- 59
            :|.|||:..|:.|:|.|..|:...||.:.:..       .|:.:     |.:..||..       
Zfish    14 LVFDIGSFSTRAGYAGEDCPKADFPTTIGVNAEEEGPADMGVEQESNSGRSYYIDTTALHVPRAG 78

  Fly    60 ------------ELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDV 112
                        |.:|.....:..|:.||:...|.....::.|..:.|...||.|..::|.|:::
Zfish    79 VELISPLKNGMIEDWDAFQAIIDHIYSKHIKSEPGLHPVLMSEAPWNSRAKREKLTELIFEHYNI 143

  Fly   113 SSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLV 177
            .:.......::........|.||:|.|.:.|:.:||..|..:..........|..|..:.:....
Zfish   144 PAFFLCKTAVLTAFANGRATGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQ 208

  Fly   178 ESGV----------KE------------------------SLLTESVLEDIKVRTCFVTTMERAK 208
            |..:          ||                        :.:...|::|.:.....|:.     
Zfish   209 EMNIDTVPSYMIASKEPVREGAPAMWTKKDKLPPVSKSWHTFMCNEVIQDFQASVLQVSD----- 268

  Fly   209 ARANGDENQPTPAPDVDYIVSDNDAVIQVP-------GLLRESAYEIMFEASNERD-------SL 259
              :..||......|.|.|         ::|       |..|....|.:|:.||.:.       .:
Zfish   269 --SPYDEQVAAQMPTVHY---------EMPSGYSTDFGAERLRIPEGLFDPSNVKGLSGNTMLGV 322

  Fly   260 PHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQELQHLLTEDPFYAERFHGELQFKF 324
            .|::..||..|.:|:|..|..||.:.||.:::||...||.:||          :::....::.|.
Zfish   323 GHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTERLNREL----------SQKAPPSMRLKL 377

  Fly   325 F--NAVGKQNFTAWLGGALCGATDLIQTRSLVKETY 358
            .  |:..::.|::|:||::..:....|...:.|:.|
Zfish   378 IACNSSIERRFSSWIGGSILASLGTFQQMWISKQEY 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 79/406 (19%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 83/426 (19%)
actl6bXP_005170633.1 NBD_sugar-kinase_HSP70_actin 10..425 CDD:302596 83/426 (19%)
Actin 11..426 CDD:278451 83/426 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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