DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and zgc:101810

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001007773.1 Gene:zgc:101810 / 493612 ZFINID:ZDB-GENE-041121-7 Length:394 Species:Danio rerio


Alignment Length:379 Identity:84/379 - (22%)
Similarity:147/379 - (38%) Gaps:78/379 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IVLDIGTAYTKLGFAAEAYPRKIMPT----EVVMTTTGIR----------------KRLFDYDTP 58
            ||.|.||.:.|.|||...:|..|.|.    .::.:.|.:.                :.:.:...|
Zfish     9 IVCDNGTGFVKCGFAGSNFPDHIFPALVGRPIIRSDTKVGSIEIKDLMVGDEASECRSMLEVTYP 73

  Fly    59 EE------------LYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFD 111
            .|            |:|      .|...:.|.:||.:.|.:|.|........|:.:|.|:|..:.
Zfish    74 MENGMVRSWEDMIHLWD------HTFGPQRLNISPPDCKVLLTEPPMNPMKNRQKIAEVMFETYR 132

  Fly   112 VSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQL 176
            ...:......::.|....:.|.:|:|.|...|.:.||:.|..:....:.....|..|...:.:.|
Zfish   133 FHGIYVAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLL 197

  Fly   177 VESGVKESLLTE-SVLEDIKVRTCFV-TTMERAKARANGDENQPTPAPDVDYIVSDNDAVIQVPG 239
            :..|...:...: ..:..:|.:.||| ..:|:.:..||     .|......|::.|. .:|:|.|
Zfish   198 LLRGYAFNHTADFETVRMMKEKLCFVGYNIEQEQQLAN-----ETTVLVESYMLPDG-RMIRVGG 256

  Fly   240 LLRESAYEIMFEASNERDSLPHLI-----------LRSILDCTLDVRRALVESVFLVGGGSMVQG 293
             .|..|.|.:|:        |||:           ..:|....:|:|..|.:.:.|.||.:|..|
Zfish   257 -ERFGAPEALFQ--------PHLVNVEGVGVAELLFNTIQAADIDLRADLYKHIVLSGGSTMYPG 312

  Fly   294 LLARLRQELQHLLTEDPFYAER-FHGELQ----FKF-FNAVGKQNFTAWLGGAL 341
            |.:||.:|::.|      |.|| ..|:.:    ||. .....::....::|||:
Zfish   313 LPSRLEREIKQL------YLERVLKGDTEKLSKFKIRIEDPPRRKHMVFMGGAV 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 82/376 (22%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 84/379 (22%)
zgc:101810NP_001007773.1 ACTIN 6..382 CDD:214592 84/379 (22%)
NBD_sugar-kinase_HSP70_actin 6..382 CDD:302596 84/379 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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