DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Act88F

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster


Alignment Length:386 Identity:85/386 - (22%)
Similarity:159/386 - (41%) Gaps:66/386 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTGIR----------KR---------- 51
            :|:|.|:...|.|||.:..||.:.|:.|       ||...|.:          ||          
  Fly     9 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73

  Fly    52 ---LFDYDTPEELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDVS 113
               :.::|..|:::..       .|:..|.|:|:|...:|.|........||.:.:::|..|: |
  Fly    74 HGIITNWDDMEKIWHH-------TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN-S 130

  Fly   114 SVLFVPVH-LIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLV 177
            ..::|.:. :::|......|.:|:|.|...:..:|::.|..:..|.......|..:...:.:.|.
  Fly   131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILT 195

  Fly   178 ESGVKESLLTE-SVLEDIKVRTCFVT---TMERAKARANGDENQPTPAPDVDYIVSDNDAVIQVP 238
            |.|...:...| .::.|||.:.|:|.   ..|.|.|.|:....:....||...|...|:      
  Fly   196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNE------ 254

  Fly   239 GLLRESAYEIMFEAS---NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQ 300
               |....|.:|:.|   .|...:...:..||:.|.:|:|:.|..:..|.||.:|..|:..|:::
  Fly   255 ---RFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQK 316

  Fly   301 ELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETYLKS 361
            |:..|..          ..::.|.. |..::.::.|:||::..:....|...:.|:.|.:|
  Fly   317 EITALAP----------STIKIKII-APPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 80/363 (22%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 85/386 (22%)
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 85/386 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467823
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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