DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and actr2a

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_021326108.1 Gene:actr2a / 406820 ZFINID:ZDB-GENE-040426-2894 Length:399 Species:Danio rerio


Alignment Length:405 Identity:95/405 - (23%)
Similarity:156/405 - (38%) Gaps:80/405 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QEKPPIVLDIGTAYTKLGFAAEAYPRKIMPT----EVVMTTTGIRK------RLFDYDTPEELYD 63
            |.|..:|.|.||.:.|.|:|...:|..|.|.    .::.:|..:..      |..|....:|. .
Zfish     4 QGKKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTAKVGNIEIKDYRRMDLMVGDEA-S 67

  Fly    64 QLVDFLQTIF------------FKHLL----------VSPKERKFVLVENVFGSTVLRETLARVL 106
            :|...|:..:            .|||.          :..:..|.:|.|.....|..||.:..|:
Zfish    68 ELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDSRNCKILLTEPPMNPTKNREKIIEVM 132

  Fly   107 FVHFDVSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAE 171
            |..:..|.|......::.|....:.|.:|||.|...|.:.||:.|..:....:.....|..|...
Zfish   133 FETYQFSGVYIAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRY 197

  Fly   172 IKRQLVESG--VKESLLTESVLEDIKVRTCFV-TTMERAKARANGDENQPTPAPDVDYIVSDNDA 233
            :.:.|:..|  ...|...|:| ..:|.:.|:| ..:|:.:..|     ..|......|.:.|. .
Zfish   198 LIKLLLLRGYAFNHSADFETV-RMMKEKLCYVGYNIEQEQKLA-----LETTVLVESYTLPDG-R 255

  Fly   234 VIQVPGLLRESAYEIMFEASNERDSLPHLI-----------LRSILDCTLDVRRALVESVFLVGG 287
            ||:|.| .|..|.|.:|:        ||||           ..:|....:|.|....:.:.|.||
Zfish   256 VIKVGG-ERFEAPEALFQ--------PHLINVEGVGVAELLFNTIQAADIDTRAEFYKHIVLSGG 311

  Fly   288 GSMVQGLLARLRQELQHLLTEDPFYAER-FHGEL----QFKF-FNAVGKQNFTAWLGGALCGATD 346
            .:|..||.:||.:||:.|      |.|| ..|::    :||. .....::....:||||:  ..|
Zfish   312 STMYPGLPSRLERELKQL------YLERVLKGDVDKLSKFKIRIEDPPRRKHMVFLGGAV--LAD 368

  Fly   347 LIQTRS---LVKETY 358
            :::.:.   :.:|.|
Zfish   369 IMKDKDNFWMTREEY 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 89/380 (23%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 93/402 (23%)
actr2aXP_021326108.1 ACTIN 6..393 CDD:214592 94/403 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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