DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Arp53D

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster


Alignment Length:375 Identity:83/375 - (22%)
Similarity:147/375 - (39%) Gaps:73/375 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IVLDIGTAYTKLGFAAEAYPRKIMPTEV-----------------VMTTTGIRKR---------- 51
            :|:|.|:...|.||:.|..||.:.|:.|                 |:.....|||          
  Fly    49 VVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYPIE 113

  Fly    52 ---LFDYDTPEELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDVS 113
               :.::|..|.::....:.|:        ..|.:...:|.|........||.:..::|.||.|.
  Fly   114 HGMVKNWDEMEMVWQHTYELLR--------ADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVP 170

  Fly   114 SVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLVE 178
            :.......:::|........:|||.|...|..:|::.|..:..|.......|..:...:.:.|:|
  Fly   171 AFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLE 235

  Fly   179 SGVKESLLTE-SVLEDIKVRTCFVTTMERAKARANGDENQPTPAPDVDYIVSD------NDAVIQ 236
            .||......| .::.:||.:.|:| :|..||......:.:....||...||..      .:|:.|
  Fly   236 RGVTMGTSAEREIVREIKEKLCYV-SMNYAKEMDLHGKVETYELPDGQKIVLGCERFRCPEALFQ 299

  Fly   237 VPGLLRESAYEIM--FEASNERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLR 299
             |.||.:   |:|  .||::          .||.:|.:|:|:.:..::.|.||.:|.:.:..|..
  Fly   300 -PSLLGQ---EVMGIHEATH----------HSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFL 350

  Fly   300 QELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQ 349
            |:|          .|.....::.| .||...:.|:.|.||::..:....|
  Fly   351 QDL----------TEMAPPSIRIK-VNASPDRRFSVWTGGSVLASLTSFQ 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 81/364 (22%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 83/375 (22%)
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 83/375 (22%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 83/375 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467771
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11937
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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