DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Actr3b

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001178789.1 Gene:Actr3b / 362298 RGDID:1565759 Length:418 Species:Rattus norvegicus


Alignment Length:440 Identity:98/440 - (22%)
Similarity:174/440 - (39%) Gaps:109/440 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PPIVLDIGTAYTKLGFAAEAYPRKIMPT-----EVVMTTTGIRKRL------FDY-------DTP 58
            ||.|:|.||.|||||:|....|:.|:|:     |........::|:      .|:       |.|
  Rat     6 PPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAIDKP 70

  Fly    59 E------------ELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFD 111
            .            |.:|.:..|::.:.||:|...|::..|::.|....:...||.||.::|..|:
  Rat    71 TYATKWPIRHGIVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFN 135

  Fly   112 VSSVLFVPVHLIALS-----------TLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGG 165
            |..:......::||:           ||   |.:|:|.|...|.|:||..|..|.:..|.....|
  Rat   136 VPGLYIAVQAVLALAASWTSRQVGERTL---TGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAG 197

  Fly   166 SAIHAEIKRQLVESGV----KESLLTESVLEDIKVRTCFVTTMERAKARANGDENQPTPAPDV-- 224
            ..|...|::.|.|..|    ::||.|...   ||.:.|::                   .||:  
  Rat   198 RDITYFIQQLLREREVGIPPEQSLETAKA---IKEKYCYI-------------------CPDIVK 240

  Fly   225 ---DYIVSDNDAVIQVPGLLRESAYEIMFEASNER------------------DSLPHLILRSIL 268
               .|.|.....:.|..|:...:..:.:.:...||                  :|:..::...|.
  Rat   241 EFAKYDVDPRKWIKQYTGINAINQRKFIIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVIQ 305

  Fly   269 DCTLDVRRALVESVFLVGGGSMVQGLLARLRQELQHLLTEDPFYAERFHG--------ELQFKFF 325
            :|.:||||.|.:::.|.||.:|.:....||:::|:.::......::...|        |:|....
  Rat   306 NCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSQELSGGRIKPKPVEVQVITH 370

  Fly   326 NAVGKQNFTAWLGGALCGATDLIQTRSLVKETYLKSEHVPDWSNLCDNRP 375
            :   .|.:..|.||::     |..|....:..:.|.::.....::|.:.|
  Rat   371 H---MQRYAVWFGGSM-----LASTPEFFQVCHTKKDYEEYGPSICRHNP 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 94/431 (22%)
Actr3bNP_001178789.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 96/435 (22%)

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