DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Actl6a

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001034122.1 Gene:Actl6a / 361925 RGDID:1307747 Length:429 Species:Rattus norvegicus


Alignment Length:429 Identity:80/429 - (18%)
Similarity:149/429 - (34%) Gaps:110/429 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IVLDIGTAYTKLGFAAEAYPRKIMPTEV-----------VMTTTGIRKR----LFDYDT-----P 58
            :|.|||:...:.|:|.|..|:...||.:           :|...|.:.:    .:..||     |
  Rat    14 LVFDIGSYTVRAGYAGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDTNALRVP 78

  Fly    59 EEL--------------YDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVH 109
            .|.              :|.....|...:..|:.........::.|..:.:...||.|..::|.|
  Rat    79 RESMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEH 143

  Fly   110 FDVSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKR 174
            :.:.:.......::........|.|::|.|.:.|:.:||..|..:..........|..|..:.:.
  Rat   144 YSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRE 208

  Fly   175 QLVESGV------------------------KESL--LTES--------VLEDIKVRTCFVTTME 205
            ...|..:                        ||.|  :|.|        |::|.:.....|:.  
  Rat   209 LFQEMNIELIPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSD-- 271

  Fly   206 RAKARANGDENQPTPAPDVDYIVSDNDAVIQVP-------GLLRESAYEIMFEASNERD------ 257
                 :..||......|.|.|         :.|       |..|....|.:|:.||.:.      
  Rat   272 -----STYDEQVAAQMPTVHY---------EFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTM 322

  Fly   258 -SLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQELQHLLTEDPFYAERFHGELQ 321
             .:.|::..|:..|.:|:|..|..||.:.||.:::|....||.:||          :::....::
  Rat   323 LGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNREL----------SQKTPPSMR 377

  Fly   322 FKFF--NAVGKQNFTAWLGGALCGATDLIQTRSLVKETY 358
            .|..  |...::.|::|:||::..:....|...:.|:.|
  Rat   378 LKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEY 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 80/429 (19%)
Actl6aNP_001034122.1 ASKHA_NBD_Arp4_ACTL6-like 8..420 CDD:466846 80/429 (19%)

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