DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Actr8

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001296388.1 Gene:Actr8 / 361107 RGDID:1311878 Length:624 Species:Rattus norvegicus


Alignment Length:390 Identity:75/390 - (19%)
Similarity:135/390 - (34%) Gaps:123/390 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KHLLVSPKERKF----VLVENVFGSTVLRETLARVLFVHFDVSSVLFVPVHLIALSTLAVPTALV 135
            |:|.:..|:.|:    :|:.:::....::| |..::.:....:.::.....:.|.....:.:..|
  Rat   218 KYLEIPLKDLKYYRCILLIPDIYNKQHVKE-LVHMILMKMGFAGIVVHQESVCATFGSGLSSTCV 281

  Fly   136 VDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAI--------------HAE----------IKRQL 176
            ||||..:|||..|..||.........:||||.:              :.|          :.:.|
  Rat   282 VDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLANKMDCLLLQHL 346

  Fly   177 VE---------SGVKE-----------SLLTESVLEDIKVRTCF--------------VTTMER- 206
            .|         ||:::           :||.:..|.|.|::...              :||::. 
  Rat   347 KETFCHLDQDISGLQDHEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHR 411

  Fly   207 ------------------------AKARAN-----------GD-ENQPTPAP------DVDYIVS 229
                                    |||.|:           || ..|.:..|      :||...|
  Rat   412 SQGDPEDPHDEHYLLATQSKQEQSAKATADRKSASKPIGFEGDLRGQSSDLPERLHSQEVDLASS 476

  Fly   230 DNDAVI-------QVPGLLRESAYEIMFEASNERDSLPHLILRSILDC--TLDVRRALVESVFLV 285
            ..|.::       .:..|:.......:||  .:...|...||.|: ||  :.|.::.:..|:.:|
  Rat   477 QGDCLMAGNESEEALTALMSRKTAISLFE--GKALGLDKAILHSV-DCCSSDDTKKKMYSSILVV 538

  Fly   286 GGGSMVQGLLARLRQELQH-LLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQ 349
            |||.|..    :.::.||| :|.:.|....|....:..............:|.|||:....|..|
  Rat   539 GGGLMFH----KAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLISWKGGAVLACLDTTQ 599

  Fly   350  349
              Rat   600  599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 71/379 (19%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 75/390 (19%)
Actr8NP_001296388.1 NBD_sugar-kinase_HSP70_actin 162..619 CDD:418402 75/390 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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