DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Actr1b

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001034117.2 Gene:Actr1b / 316333 RGDID:1307380 Length:376 Species:Rattus norvegicus


Alignment Length:395 Identity:83/395 - (21%)
Similarity:158/395 - (40%) Gaps:69/395 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPIYESVMQEKPPIVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTGIRKRLF----- 53
            |..|:.:..:  |:|:|.|:...|.|||.:..|:...|..|       || ...:...||     
  Rat     1 MESYDIIANQ--PVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVM-AGALEGDLFIGPKA 62

  Fly    54 -------------------DYDTPEELYDQLV--DFLQTIFFKHLLVSPKERKFVLVENVFGSTV 97
                               |::..|.::..:.  |.|||.        .:|...:|.|.....:.
  Rat    63 EEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTF--------SEEHPVLLTEAPLNPSK 119

  Fly    98 LRETLARVLFVHFDVSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQS 162
            .||..|.|.|..|:|.::......:::|......|.:|:|.|...|..:|::.|..:..:.....
  Rat   120 NREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVD 184

  Fly   163 YGGSAIHAEIKRQLVESGVKESLLTE-SVLEDIKVRTCFVTTMERAKARANGDENQPTPAPDVDY 226
            ..|..:...::..|.:.|.......| .|:..||.|.|:::        .|..:::......|.|
  Rat   185 IAGRDVSRYLRLLLRKEGADFHTSAEFEVVRTIKERACYLS--------INPQKDEALETEKVQY 241

  Fly   227 IVSDNDAVIQVPGLLRESAYEIMFE---ASNERDSLPHLILRSILDCTLDVRRALVESVFLVGGG 288
            .:.|...:...|...|  |.|::|:   ..:|.:.|..::..:|....:|:||.|..::.|.||.
  Rat   242 TLPDGSTLDVGPARFR--APELLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGS 304

  Fly   289 SMVQGLLARLRQELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSL 353
            ::.:|...||..|::.|..:|          ::.| .:|..::.::.|:||::..:.|..:...:
  Rat   305 TLFKGFGDRLLSEVKKLAPKD----------VKIK-ISAPQERLYSTWIGGSILASLDTFKKMWV 358

  Fly   354 VKETY 358
            .|:.|
  Rat   359 SKKEY 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 80/382 (21%)
Actr1bNP_001034117.2 ASKHA_NBD_Arp1 9..375 CDD:466820 81/387 (21%)

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