DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Actbl2

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001099879.1 Gene:Actbl2 / 294732 RGDID:1309504 Length:376 Species:Rattus norvegicus


Alignment Length:382 Identity:81/382 - (21%)
Similarity:150/382 - (39%) Gaps:50/382 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VMQEKPPIVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTG-----------IRKRLF 53
            |..|...:|:|.|:...|.||..:..||.:.|:.|       ||...|           .::.:.
  Rat     2 VDDELGALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQSKRGIL 66

  Fly    54 DYDTPEE-----LYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDVS 113
            ....|.|     .:|.:.......|:..|.|:|.|...:|.|......:.||.:.:::|..|:..
  Rat    67 TLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQIMFEAFNTP 131

  Fly   114 SVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLVE 178
            ::......:::|......|..|:|.|...|..:|::.|..:..........|..:...:.:.|.|
  Rat   132 AMYVAIQAVLSLYASGRTTGNVMDSGDGVTHTVPIYEGYALPHGILRLDLAGRDLTDYLMKILTE 196

  Fly   179 SGVKESLLTE-SVLEDIKVRTCFVT---TMERAKARANGDENQPTPAPDVDYIVSDNDAVIQVPG 239
            .|...:...| .::.|:|.:.|:|.   ..|...|.|:....:....||...|...|:       
  Rat   197 RGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAAASSSLERSYELPDGQVITIGNE------- 254

  Fly   240 LLRESAYEIMFEAS---NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQE 301
              |....|.:|:.|   .|...:......||:.|.:|:|:.|..:..|.||.:|..|:..|:::|
  Rat   255 --RFRCPEAIFQPSFLGIESRGIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKE 317

  Fly   302 LQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETY 358
               ::|..|       ..::.|.. |..::.::.|:||::..:....|...:.|:.|
  Rat   318 ---IVTLAP-------STMKIKII-APPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 75/358 (21%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 79/377 (21%)
Actbl2NP_001099879.1 NBD_sugar-kinase_HSP70_actin 1..376 CDD:302596 81/382 (21%)
ACTIN 8..376 CDD:214592 79/376 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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