DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Actl9b

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001013915.1 Gene:Actl9b / 292516 RGDID:1359476 Length:411 Species:Rattus norvegicus


Alignment Length:418 Identity:94/418 - (22%)
Similarity:168/418 - (40%) Gaps:89/418 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PIYESVMQE------------KPPIVLDIGTAYTKLGFAAEAYPRKIMPTEVVMTTTGIR-KRLF 53
            |:|:|.:||            ...:|:|:||...|:|||.:.     .||.:|....|.: ||..
  Rat    23 PVYKSPLQEPCGVFGNKGTTKMSGVVIDMGTGICKMGFAGQT-----RPTYIVRNIVGCQPKRRT 82

  Fly    54 DYDTPE-ELY-------------------DQLVDFLQTIF-FKHLL-----VSPKERKFVLVENV 92
            ..:.|: |::                   ..:||:....| ::|:|     :..::...:..:..
  Rat    83 TMEQPKMEMFIGEAAHARPELTLMHPVRNGIVVDWEAAEFIWRHILENDLRLDTQDHPLLFTDPP 147

  Fly    93 FGSTVLRETLARVLFVHFDVSSVLFVPVHLIALSTLAV-----PTALVVDVGYSETSVMPVFSGV 152
            |.....||.|..|.|     .|:....:::.:.|.|:|     ...||||.|:..:..:|||.|.
  Rat   148 FNPASNREKLVEVAF-----ESLHSPAIYVASQSVLSVYANGRVNGLVVDTGHGVSYTVPVFQGY 207

  Fly   153 QIMAAFKDQSYGGSAIHAEIKRQLVESGV---KESLLTESVLEDIKVRTCFVTTMERAKARANGD 214
            .:.:..:.....|..:...:..:::.|..   ||.:.|   :|:||.:.|:| .::..|.:...|
  Rat   208 NLPSGIQRMDLAGHYLTKFLAEKILRSSFAVKKEDMDT---MENIKQQYCYV-ALDFQKEQGRPD 268

  Fly   215 E--NQPTPAPDVDYIVSDNDAVIQVPGLLRESAYEIMFEASNERD----SLPHLILRSILDCTLD 273
            |  .:....||...|....: :.|.|        |::|...:...    .||.::..|:.....:
  Rat   269 EKFRRCLKLPDGQMITVGKE-LFQCP--------ELLFHPPDTSGPSSLGLPSMVEHSLSTVPQE 324

  Fly   274 VRRALVESVFLVGGGSMVQGLLARLRQELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLG 338
            :|..:.::|.|.||.|:..|...|.:.||...|           |........|...:|.:.|:|
  Rat   325 LRADMEQNVLLCGGSSLFTGFEGRFKTELLRRL-----------GPEAHVVVVAQANRNLSVWIG 378

  Fly   339 GALCGATDLIQTRSLVKETYLKSEHVPD 366
            |::..:....|||.:::|.|  .||.||
  Rat   379 GSILASLCAFQTRWVLREQY--EEHGPD 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 79/369 (21%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 89/396 (22%)
Actl9bNP_001013915.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 94/418 (22%)
NBD_sugar-kinase_HSP70_actin 45..410 CDD:302596 89/396 (22%)
Actin 47..411 CDD:278451 89/394 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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