DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Actg2

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_037025.1 Gene:Actg2 / 25365 RGDID:2027 Length:376 Species:Rattus norvegicus


Alignment Length:389 Identity:85/389 - (21%)
Similarity:155/389 - (39%) Gaps:68/389 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QEKPPIVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTGIR----------KR----- 51
            :|...:|.|.|:...|.|||.:..||.:.|:.|       ||...|.:          ||     
  Rat     4 EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68

  Fly    52 --------LFDYDTPEELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFV 108
                    :.::|..|:::..       .|:..|.|:|:|...:|.|........||.:.:::|.
  Rat    69 KYPIEHGIITNWDDMEKIWHH-------SFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFE 126

  Fly   109 HFDVSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIK 173
            .|:|.::......:::|......|.:|:|.|...|..:|::.|..:..|.......|..:...:.
  Rat   127 TFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLM 191

  Fly   174 RQLVESGVKESLLT---ESVLEDIKVRTCFVT---TMERAKARANGDENQPTPAPDVDYIVSDND 232
            :.|.|.|.  |.:|   ..::.|||.:.|:|.   ..|.|.|.::....:....||...|...|:
  Rat   192 KILTERGY--SFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNE 254

  Fly   233 AVIQVPGLLRESAYEIMFEAS---NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGL 294
                     |....|.:|:.|   .|...:......||:.|.:|:|:.|..:..|.||.:|..|:
  Rat   255 ---------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGI 310

  Fly   295 LARLRQELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETY 358
            ..|:::|:..|..          ..::.|.. |..::.::.|:||::..:....|...:.|..|
  Rat   311 ADRMQKEITALAP----------STMKIKII-APPERKYSVWIGGSILASLSTFQQMWISKPEY 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 84/384 (22%)
Actg2NP_037025.1 ASKHA_NBD_actin 7..371 CDD:466823 84/386 (22%)

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