DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and arp-11

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_501314.2 Gene:arp-11 / 183628 WormBaseID:WBGene00016793 Length:384 Species:Caenorhabditis elegans


Alignment Length:386 Identity:104/386 - (26%)
Similarity:191/386 - (49%) Gaps:48/386 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KLGFAAEAYPRKIMPTEVV-----MTTTGIRKRLFDYDT---PEELYDQ-LVDFLQTIFFKHLLV 79
            ::|.|.|..||.|:.||.|     :.|:.....|.:..|   ..|.|:: |..||:.:|.|  ::
 Worm     3 RIGCAGEITPRHIIRTEYVDDEGKLITSDELLALNNRKTATKSTEYYEEILYKFLRIVFLK--VL 65

  Fly    80 SPKERKFVLVENVFGSTVLRETLARVLFVHFDVSSVLFVPVHLIALSTLAVPTALVVDVGYSETS 144
            :|.:|..:.||::|.|..||.|:.:::.......|::|:|.|:.|........|||||:|:||..
 Worm    66 APTDRPVIFVESIFMSESLRNTITKIVVEKIRCKSLMFMPSHVCATFPFNTQNALVVDIGHSECI 130

  Fly   145 VMPVFSGVQIMAAFKD-QSYGGSAIHAEIKRQLVESGVKESL------LTESVLEDIK----VRT 198
            .:|:..||.::..|:. :|..|..:...::.|:.:.|....|      :||:..:||.    :.|
 Worm   131 AVPIIEGVTMLNEFESARSICGRQLERRVREQMEKYGQIAELNGERRAITENDWQDIDACKLIET 195

  Fly   199 CFVTTM----ERAKARANGDENQPTPAPDVDYIVSD-----NDAVIQVPGLLRESAYEIMF-EAS 253
            ..::.:    |||:.....:.::....||::.:..:     |..:..||.::.|::.||.| |..
 Worm   196 LSLSLICLDKERAENWTKWEASEEGEKPDIETLCKERLFPNNGKIFVVPPVVFETSTEIFFNENL 260

  Fly   254 NERD---SLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQELQHLLTEDPFYAER 315
            |...   |||.|:.:.:..|.:|:|:.|..::.|.||.|.:.||:.||.||:|.:       .|:
 Worm   261 NPTSFDLSLPKLLHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVI-------DEK 318

  Fly   316 FHGELQ--FKFFNAVGKQN---FTAWLGGALCGA-TDLIQTRSLVKETYLKSEHVPDWSNL 370
            .:.::.  .||:.....:|   |.:|||.:|.|: .:.|:.:||..|.:...:...||:::
 Worm   319 NNSKIAVIVKFYQFSEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEWKNGKLAADWTDI 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 96/353 (27%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 102/381 (27%)
arp-11NP_501314.2 NBD_sugar-kinase_HSP70_actin 3..368 CDD:302596 102/373 (27%)
ACTIN 3..367 CDD:214592 102/372 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162446
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 124 1.000 Inparanoid score I3286
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56110
OrthoDB 1 1.010 - - D431718at33208
OrthoFinder 1 1.000 - - FOG0005826
OrthoInspector 1 1.000 - - oto17753
orthoMCL 1 0.900 - - OOG6_104680
Panther 1 1.100 - - LDO PTHR11937
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5702
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.800

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