DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and act-4

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_508841.1 Gene:act-4 / 180767 WormBaseID:WBGene00000066 Length:376 Species:Caenorhabditis elegans


Alignment Length:389 Identity:84/389 - (21%)
Similarity:156/389 - (40%) Gaps:64/389 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EKPPIVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTGIR----------KR------ 51
            |...:|:|.|:...|.|||.:..||.:.|:.|       ||...|.:          ||      
 Worm     5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 69

  Fly    52 -------LFDYDTPEELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVH 109
                   :.::|..|:::..       .|:..|.|:|:|...:|.|........||.:.:::|..
 Worm    70 YPIEHGIVTNWDDMEKIWHH-------TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127

  Fly   110 FDVSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKR 174
            |:..::......:::|......|.:|:|.|...|..:|::.|..:..|.......|..:...:.:
 Worm   128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192

  Fly   175 QLVESGVKESLLTE-SVLEDIKVRTCFVT---TMERAKARANGDENQPTPAPDVDYIVSDNDAVI 235
            .|.|.|...:...| .::.|||.:.|:|.   ..|.|.|.::....:....||...|...|:   
 Worm   193 ILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE--- 254

  Fly   236 QVPGLLRESAYEIMFEAS---NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLAR 297
                  |....|.:|:.|   .|...:......||:.|.:|:|:.|..:..|.||.:|..|:..|
 Worm   255 ------RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADR 313

  Fly   298 LRQELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETYLKS 361
            :::|:..|..          ..::.|.. |..::.::.|:||::..:....|...:.|:.|.:|
 Worm   314 MQKEITALAP----------STMKIKII-APPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 83/385 (22%)
act-4NP_508841.1 ASKHA_NBD_actin 7..371 CDD:466823 83/387 (21%)

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