DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and act-2

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001370033.1 Gene:act-2 / 179534 WormBaseID:WBGene00000064 Length:376 Species:Caenorhabditis elegans


Alignment Length:385 Identity:83/385 - (21%)
Similarity:155/385 - (40%) Gaps:64/385 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTGIR----------KR---------- 51
            :|:|.|:...|.|||.:..||.:.|:.|       ||...|.:          ||          
 Worm     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73

  Fly    52 ---LFDYDTPEELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDVS 113
               :.::|..|:::..       .|:..|.|:|:|...:|.|........||.:.:::|..|:..
 Worm    74 HGIVTNWDDMEKIWHH-------TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131

  Fly   114 SVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLVE 178
            ::......:::|......|.:|:|.|...|..:|::.|..:..|.......|..:...:.:.|.|
 Worm   132 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 196

  Fly   179 SGVKESLLTE-SVLEDIKVRTCFVT---TMERAKARANGDENQPTPAPDVDYIVSDNDAVIQVPG 239
            .|...:...| .::.|||.:.|:|.   ..|.|.|.::....:....||...|...|:       
 Worm   197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE------- 254

  Fly   240 LLRESAYEIMFEAS---NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQE 301
              |....|.:|:.|   .|...:......||:.|.:|:|:.|..:..|.||.:|..|:..|:::|
 Worm   255 --RFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317

  Fly   302 LQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETYLKS 361
            :..|..          ..::.|.. |..::.::.|:||::..:....|...:.|:.|.:|
 Worm   318 ITALAP----------STMKIKII-APPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 83/385 (22%)
act-2NP_001370033.1 ASKHA_NBD_actin 7..371 CDD:466823 83/385 (22%)

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