DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and swsn-6

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_500801.2 Gene:swsn-6 / 177325 WormBaseID:WBGene00022774 Length:436 Species:Caenorhabditis elegans


Alignment Length:462 Identity:94/462 - (20%)
Similarity:165/462 - (35%) Gaps:163/462 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IVLDIGTAYTKLGFAAEAYPRKIMPTEVVMTTTGIRKRLFDYDTPE------------------- 59
            :|.|.|:...::|||.|.||:..:|:.:     .:::.|.| ||.|                   
 Worm    14 LVFDAGSQSFRVGFAGEEYPKGDIPSYI-----AVQEALPD-DTIEKQEAMEEGDNSKVQTKREK 72

  Fly    60 ------------------------------ELYDQLVDFLQTIFFKHLLVS-PKERKFVLVENVF 93
                                          ||::::|:.    .::::|.| |.|...:..|:.:
 Worm    73 NFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEH----SYENILYSNPSEHPVLFSESSW 133

  Fly    94 GSTVLRETLARVLFVHFDVSSVLFVPVHL----IALSTLAV--PTALVVDVGYSETSVMPVFSGV 152
            .....||.|..::|..|.      ||.:.    :.||..|.  ...|:||.|.::|||:|||.|.
 Worm   134 NDRARREKLTEIMFEKFQ------VPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGY 192

  Fly   153 QIMAAFKDQSYGGSAIHAEIKRQLVES----------GVKESL----------------LTES-- 189
            .:..|......||..|..::.:.|.:.          |.||.:                :|:|  
 Worm   193 AVTHAVVKCPIGGDLITEQLAQMLDQQKIDVIPTYRIGGKEEVNEGEAPKWTPRKNLPQVTKSYD 257

  Fly   190 ------VLEDI---KVRTCFVTTMERAKARANGDENQPTPAPDVDYIVSDNDAVIQVP------- 238
                  :|||:   .::.|..:.                   |:||:    |.:...|       
 Worm   258 AFMKKMLLEDMAATMLQLCDTSI-------------------DMDYV----DKLPSTPYAFPNGY 299

  Fly   239 ----GLLRESAYEIMFE-----ASNERDSLPHLILRSILDCTL---DVRRALVESVFLVGGGSMV 291
                |..|....|.:|:     |..::|.|..:...:.....|   |:|..|..:|.:.||.|::
 Worm   300 TKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGGNSLI 364

  Fly   292 QGLLARLRQELQHLLTEDPFYAERFHGELQFKFFNA--VGKQNFTAWLGGALCGATDLIQTRSLV 354
            .|...||...|          |.:....::.:.|.|  ..::.:.||:||::.|:....|...:.
 Worm   365 LGFTERLNYAL----------ATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVS 419

  Fly   355 KETYLKS 361
            |..|.:|
 Worm   420 KAEYDES 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 94/462 (20%)
swsn-6NP_500801.2 ASKHA_NBD_Arp4_ACTL6-like 8..427 CDD:466846 94/462 (20%)

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