DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and act-5

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_499809.1 Gene:act-5 / 176793 WormBaseID:WBGene00000067 Length:375 Species:Caenorhabditis elegans


Alignment Length:388 Identity:87/388 - (22%)
Similarity:166/388 - (42%) Gaps:60/388 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QEKPPIVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTGIR----------KR----- 51
            :|...:|:|.|:...|.|||.:..||.:.|:.|       ||...|.:          ||     
 Worm     3 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

  Fly    52 --------LFDYDTPEELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFV 108
                    :.::|..|:::..       .|:..|.::|:|...:|.|........||.:.:::|.
 Worm    68 KYPIEHGIVTNWDDMEKIWHH-------TFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFE 125

  Fly   109 HFDVSSVLFVPVH-LIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEI 172
            .|: :..::|.:. :::|......|.:|:|.|...|..:|::.|..:..|.:.....|..:...:
 Worm   126 TFN-TPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYM 189

  Fly   173 KRQLVESGVKESLLTE-SVLEDIKVRTCFVT---TMERAKARANGDENQPTPAPDVDYIVSDNDA 233
            .:.|.|.|...:...| .::.|||.:.|:|.   ..|.|.|.::....:....||...|...|:.
 Worm   190 MKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNER 254

  Fly   234 VIQVPGLLRESAYEIMFEASNERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARL 298
             .:.|.:|.:.|:..|     |...:.....:||:.|.:|:|:.|..:..|.||.||..|:..|:
 Worm   255 -FRCPEVLFQPAFIGM-----EGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRM 313

  Fly   299 RQELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETYLKS 361
            ::|:|||..          ..::.|.. |..::.::.|:||::..:....|...:.|:.|.:|
 Worm   314 QKEIQHLAP----------STMKIKII-APPERKYSVWIGGSILASLSTFQQMWISKQEYDES 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 86/383 (22%)
act-5NP_499809.1 ASKHA_NBD_actin 6..370 CDD:466823 86/385 (22%)

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