DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and ACTRT1

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_612146.1 Gene:ACTRT1 / 139741 HGNCID:24027 Length:376 Species:Homo sapiens


Alignment Length:386 Identity:85/386 - (22%)
Similarity:159/386 - (41%) Gaps:71/386 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PPIVLDIGTAYTKLGFAAEAYPRKIMPTEVVMTTTGI------------RKRLFDYDT-----PE 59
            |.::.|.|:...|.|.:.|..||.::.:.:......:            ::.|:.|:.     |.
Human    10 PAVIFDNGSGLCKAGLSGEIGPRHVISSVLGHCKFNVPLARLNQKYFVGQEALYKYEALHLHYPI 74

  Fly    60 EL-----YDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVHFDVSSVLFVP 119
            |.     :|.:....:.:|.:.|.|.|.::..::.|.......:||.||.::|..|.|.. .::.
Human    75 ERGLVTGWDDMEKLWKHLFERELGVKPSQQPVLMTEPSLNPREIREKLAEMMFETFSVPG-FYLS 138

  Fly   120 VHLI-ALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLVESGVK- 182
            .|.: ||...|..|.||||.|...|..:|:|.|..:..|.......|..|...:.|.|..||.. 
Human   139 NHAVAALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLTRLLFASGFNF 203

  Fly   183 ESLLTESVLEDIKVRTCFVT-TMERAKARANGDENQPTPAPDVDYIVSDNDAVIQVPGLLRESAY 246
            ..:|.::|:.:||.:.|::. ..|:...::.|:.......|| .:::...|.:.|||        
Human   204 PCILNKAVVNNIKEKLCYIALEPEKELRKSRGEVLGAYRLPD-GHVIHFGDELYQVP-------- 259

  Fly   247 EIMF---EASNERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQELQHL--- 305
            |::|   :.......|..::..||:.|..|::..|...:.|.||.:::.||..||.:|::.|   
Human   260 EVLFAPDQLGIHSPGLSKMVSSSIMKCDTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQLASK 324

  Fly   306 -----LTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETYLKS 361
                 :|..|                   .:.|:||:|.:      ::.:.|..|:.::.|
Human   325 GTPIKITASP-------------------DRCFSAWIGAS------IMTSMSSFKQMWVTS 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 82/363 (23%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 85/386 (22%)
ACTRT1NP_612146.1 ACTIN 9..376 CDD:214592 85/386 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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