DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Actg1

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_033739.1 Gene:Actg1 / 11465 MGIID:87906 Length:375 Species:Mus musculus


Alignment Length:390 Identity:84/390 - (21%)
Similarity:157/390 - (40%) Gaps:64/390 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QEKPPIVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTGIR----------KR----- 51
            :|...:|:|.|:...|.|||.:..||.:.|:.|       ||...|.:          ||     
Mouse     3 EEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

  Fly    52 --------LFDYDTPEELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFV 108
                    :.::|..|:::..       .|:..|.|:|:|...:|.|........||.:.:::|.
Mouse    68 KYPIEHGIVTNWDDMEKIWHH-------TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 125

  Fly   109 HFDVSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIK 173
            .|:..::......:::|......|.:|:|.|...|..:|::.|..:..|.......|..:...:.
Mouse   126 TFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 190

  Fly   174 RQLVESGVKESLLTE-SVLEDIKVRTCFVT---TMERAKARANGDENQPTPAPDVDYIVSDNDAV 234
            :.|.|.|...:...| .::.|||.:.|:|.   ..|.|.|.::....:....||...|...|:  
Mouse   191 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE-- 253

  Fly   235 IQVPGLLRESAYEIMFEAS---NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLA 296
                   |....|.:|:.|   .|...:......||:.|.:|:|:.|..:..|.||.:|..|:..
Mouse   254 -------RFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 311

  Fly   297 RLRQELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETYLKS 361
            |:::|:..|..          ..::.|.. |..::.::.|:||::..:....|...:.|:.|.:|
Mouse   312 RMQKEITALAP----------STMKIKII-APPERKYSVWIGGSILASLSTFQQMWISKQEYDES 365

  Fly   362  361
            Mouse   366  365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 78/365 (21%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 83/387 (21%)
Actg1NP_033739.1 PTZ00281 1..375 CDD:173506 84/390 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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