DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Acta1

DIOPT Version :10

Sequence 1:NP_608338.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_033736.1 Gene:Acta1 / 11459 MGIID:87902 Length:377 Species:Mus musculus


Alignment Length:388 Identity:84/388 - (21%)
Similarity:155/388 - (39%) Gaps:68/388 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EKPPIVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTGIR----------KR------ 51
            |...:|.|.|:...|.|||.:..||.:.|:.|       ||...|.:          ||      
Mouse     6 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 70

  Fly    52 -------LFDYDTPEELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVH 109
                   :.::|..|:::..       .|:..|.|:|:|...:|.|........||.:.:::|..
Mouse    71 YPIEHGIITNWDDMEKIWHH-------TFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

  Fly   110 FDVSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKR 174
            |:|.::......:::|......|.:|:|.|...|..:|::.|..:..|.......|..:...:.:
Mouse   129 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMK 193

  Fly   175 QLVESGVKESLLT---ESVLEDIKVRTCFVT---TMERAKARANGDENQPTPAPDVDYIVSDNDA 233
            .|.|.|.  |.:|   ..::.|||.:.|:|.   ..|.|.|.::....:....||...|...|: 
Mouse   194 ILTERGY--SFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNE- 255

  Fly   234 VIQVPGLLRESAYEIMFEAS---NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLL 295
                    |....|.:|:.|   .|...:......||:.|.:|:|:.|..:..:.||.:|..|:.
Mouse   256 --------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIA 312

  Fly   296 ARLRQELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETY 358
            .|:::|:..|..          ..::.|.. |..::.::.|:||::..:....|...:.|:.|
Mouse   313 DRMQKEITALAP----------STMKIKII-APPERKYSVWIGGSILASLSTFQQMWITKQEY 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_608338.1 ASKHA_NBD_Arp10 14..370 CDD:466813 83/384 (22%)
Acta1NP_033736.1 ASKHA_NBD_actin 8..372 CDD:466823 83/386 (22%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 112..125 2/12 (17%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 360..372 2/5 (40%)

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