DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp10 and Acta1

DIOPT Version :9

Sequence 1:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001258970.1 Gene:Acta1 / 11459 MGIID:87902 Length:377 Species:Mus musculus


Alignment Length:388 Identity:84/388 - (21%)
Similarity:155/388 - (39%) Gaps:68/388 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EKPPIVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTGIR----------KR------ 51
            |...:|.|.|:...|.|||.:..||.:.|:.|       ||...|.:          ||      
Mouse     6 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 70

  Fly    52 -------LFDYDTPEELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFVH 109
                   :.::|..|:::..       .|:..|.|:|:|...:|.|........||.:.:::|..
Mouse    71 YPIEHGIITNWDDMEKIWHH-------TFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

  Fly   110 FDVSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIKR 174
            |:|.::......:::|......|.:|:|.|...|..:|::.|..:..|.......|..:...:.:
Mouse   129 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMK 193

  Fly   175 QLVESGVKESLLT---ESVLEDIKVRTCFVT---TMERAKARANGDENQPTPAPDVDYIVSDNDA 233
            .|.|.|.  |.:|   ..::.|||.:.|:|.   ..|.|.|.::....:....||...|...|: 
Mouse   194 ILTERGY--SFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNE- 255

  Fly   234 VIQVPGLLRESAYEIMFEAS---NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLL 295
                    |....|.:|:.|   .|...:......||:.|.:|:|:.|..:..:.||.:|..|:.
Mouse   256 --------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIA 312

  Fly   296 ARLRQELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETY 358
            .|:::|:..|..          ..::.|.. |..::.::.|:||::..:....|...:.|:.|
Mouse   313 DRMQKEITALAP----------STMKIKII-APPERKYSVWIGGSILASLSTFQQMWITKQEY 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 79/367 (22%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 83/386 (22%)
Acta1NP_001258970.1 PTZ00281 4..377 CDD:173506 84/388 (22%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 112..125 2/12 (17%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 360..372 2/5 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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