DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec61gamma and Gm30534

DIOPT Version :9

Sequence 1:NP_001285450.1 Gene:Sec61gamma / 32968 FlyBaseID:FBgn0031049 Length:68 Species:Drosophila melanogaster
Sequence 2:XP_006513019.1 Gene:Gm30534 / 102632470 MGIID:5589693 Length:68 Species:Mus musculus


Alignment Length:67 Identity:51/67 - (76%)
Similarity:58/67 - (86%) Gaps:0/67 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDKVVKFAEPGRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFCIMGFIGFFVKLIHIPINNII 65
            ||:|::|.||...|.||||.||||||||||||||:||:|||:||.||||||||.|.|||||||:|
Mouse     1 MDQVMQFIEPSWQFVKDSIHLVKRCTKPDRKEFQEIAMATAIGFVIMGFIGFFAKRIHIPINNVI 65

  Fly    66 VG 67
            ||
Mouse    66 VG 67

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec61gammaNP_001285450.1 SecE <12..68 CDD:412402 45/56 (80%)
Gm30534XP_006513019.1 SecE <14..67 CDD:382036 43/52 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1623399at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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