Protein Alignment Rcd-1 and AT5G12980

DIOPT Version :10

• Sequence 1: NP_608335.1
• Gene: Rcd-1 / 32966
• FlyBaseID: FBgn0031047
• Length: 304
• Species: Drosophila melanogaster
• Sequence 2: NP_196802.1
• Gene: AT5G12980 / 831138
• AraportID: AT5G12980
• Length: 311
• Species: Arabidopsis thaliana
• Alignment Length: 296
• Identity: 180/296 - (60%)
• Similarity: 218/296 - (73%)
• Gaps: 13/296 - (4%)

  Fly    10 NPQQQQQQQQQQQQTEQEKVYQWINELAHPDTRETALLELSKKRE--TDLAPMLWNSFGTACALL 72
            :|.......::....|     |.|.:|::|:.||.||.|||||||  .||||:||:|.||..|||
plant    20 SPSSSSNNDRKLSSAE-----QLILDLSNPELRENALHELSKKREIFQDLAPLLWHSVGTIPALL 79

  Fly    73 QEIVNIYPSITPPTLTAHQSNRVCNALALLQCVASHPETRTAFLQAQIPLYLYPFLSTTSKTRPF 137
            |||:.:||:::|||:|..||||||||||||||||||.:||..||:|.:|||||.||:|:||:|||
plant    80 QEIIAVYPALSPPTMTPAQSNRVCNALALLQCVASHTDTRMLFLKAHLPLYLYAFLNTSSKSRPF 144

  Fly   138 EYLRLTSLGVIGALVKTDEQEVITFLLTTEIVPLCLSIMDSGSELSKTVATFIIQKILLDESGLS 202
            ||||||||||||||||.|:.|||.|||.||||||||..|::||||||||||||:||:|||:.||.
plant   145 EYLRLTSLGVIGALVKVDDTEVIRFLLQTEIVPLCLRTMENGSELSKTVATFIVQKVLLDDVGLE 209

  Fly   203 YICQTYERFSHVAITLGKMVIQLAKDPCARLLKHVVRCYLRLSDNTRARKALGQCLPDQLRDGTF 267
            |:|.|.|||..:...||.||..||:.|.||||||::||||||:||.||..|||.||||.|||.||
plant   210 YMCTTAERFFALGRVLGNMVTSLAEGPSARLLKHIIRCYLRLTDNPRACDALGSCLPDLLRDATF 274

  Fly   268 ALCLQEDKSTKQWLQMLLKNLELGATPQQIGMSPLG 303
            :.||.:|....||||.||.|:.:|      |.:|.|
plant   275 SGCLYDDPPAMQWLQQLLHNVNVG------GRAPQG 304

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcd-1	NP_608335.1	Rcd1	32..288	CDD:461160	172/257 (67%)
AT5G12980	NP_196802.1	Rcd1	37..295	CDD:461160	172/257 (67%)