DRSC/TRiP Functional Genomics Resources

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Protein Alignment e(y)3 and Dpf1

DIOPT Version :9

Sequence 1:NP_001259719.1 Gene:e(y)3 / 32965 FlyBaseID:FBgn0087008 Length:2012 Species:Drosophila melanogaster
Sequence 2:XP_006540095.1 Gene:Dpf1 / 29861 MGIID:1352748 Length:437 Species:Mus musculus


Alignment Length:111 Identity:42/111 - (37%)
Similarity:54/111 - (48%) Gaps:14/111 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1701 CGVCLRSQHRNARDMPEAFIRCYTCRKRVHPSCVDMPPRMVGRVRNYNWQCAGCKCCIKCRSSQR 1765
            |..||....:..  .||..|.|..|.:..||||:.....|...||.|.|||..||.|..|.:|:.
Mouse   314 CDFCLGGSKKTG--CPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSEN 376

  Fly  1766 PG----------KMLYCEQCDRGYHIYCLG--LRTVPDGRWSCERC 1799
            .|          ::|:|:.||||||:|||.  :...|:|.|||..|
Mouse   377 DGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
e(y)3NP_001259719.1 PHD_SF 1700..1754 CDD:304600 19/52 (37%)
RanBP2-type Zn finger 1700..1725 CDD:275375 7/23 (30%)
RanBP2-type Zn finger 1749..1775 CDD:275375 11/35 (31%)
PHD2_PHF10 1756..1799 CDD:277004 20/54 (37%)
Dpf1XP_006540095.1 Requiem_N 52..123 CDD:372894
SFP1 <225..259 CDD:227516
PHD1_DPF1 309..366 CDD:277160 19/53 (36%)
PHD2_d4 367..422 CDD:277005 20/54 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2732
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10615
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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