DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS10b and rps1002

DIOPT Version :10

Sequence 1:NP_608324.1 Gene:RpS10b / 32953 FlyBaseID:FBgn0285947 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_595605.1 Gene:rps1002 / 3361259 PomBaseID:SPBP22H7.08 Length:147 Species:Schizosaccharomyces pombe


Alignment Length:158 Identity:79/158 - (50%)
Similarity:101/158 - (63%) Gaps:17/158 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHY 65
            |.:||.:|.||::.||::||:||||||:..||||: .:|||.||||.|||.|||.:|.::.|..:
pombe     1 MLIPKENRKAIHQALFQQGVLVAKKDFNLPKHPEV-GVPNLQVIKACQSLDSRGYLKTRYNWGWF 64

  Fly    66 YWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRP-RPAVGGPRGPGDASKTGEDRSAYRRA 129
            |:.|||||:|.||.|||||.|:||:|.||     .||| .|..|.|. |.:.|...:  :.||||
pombe    65 YYTLTNEGVEYLREYLHLPAEVVPATHKR-----QVRPAAPRAGRPE-PRERSSAAD--AGYRRA 121

  Fly   130 PGGSGVDKKGD-VGPGAGEVEFRGGFGR 156
                  :||.| ..||.....|||||||
pombe   122 ------EKKDDGAAPGGFAPSFRGGFGR 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS10bNP_608324.1 S10_plectin 3..95 CDD:427337 53/91 (58%)
rps1002NP_595605.1 COG5045 1..109 CDD:227378 62/114 (54%)

Return to query results.
Submit another query.