DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS10b and Rps10l1

DIOPT Version :9

Sequence 1:NP_001245758.1 Gene:RpS10b / 32953 FlyBaseID:FBgn0285947 Length:160 Species:Drosophila melanogaster
Sequence 2:XP_002729669.1 Gene:Rps10l1 / 100363439 RGDID:2323006 Length:165 Species:Rattus norvegicus


Alignment Length:162 Identity:108/162 - (66%)
Similarity:123/162 - (75%) Gaps:8/162 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPEL--ESIPNLHVIKAMQSLHSRGLVKEQFAWR 63
            |.|||.:|:||||.||||||:|||||.|..|||||  :::|||||:||||||.|||.||||||||
  Rat     1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWR 65

  Fly    64 HYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKT-GE-DRSAY 126
            |:|||||||||:.||.||||||||||:||:| :|.||.||||.  ||.|...|..| || ||..|
  Rat    66 HFYWYLTNEGIQYLRDYLHLPPEIVPATLRR-SRPETGRPRPK--GPEGERPARFTRGEADRDTY 127

  Fly   127 RRAPGGSGVDKKGDVGPG-AGEVEFRGGFGRG 157
            ||:....|.|||.:.|.| |.|.:||||||||
  Rat   128 RRSAVPPGADKKAEAGAGSATEFQFRGGFGRG 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS10bNP_001245758.1 S10_plectin 3..96 CDD:281497 72/94 (77%)
Rps10l1XP_002729669.1 S10_plectin 3..97 CDD:397530 72/94 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 155 1.000 Domainoid score I4126
eggNOG 1 0.900 - - E1_COG5045
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 201 1.000 Inparanoid score I3692
OMA 1 1.010 - - QHG53709
OrthoDB 1 1.010 - - D1588066at2759
OrthoFinder 1 1.000 - - FOG0001119
OrthoInspector 1 1.000 - - mtm8984
orthoMCL 1 0.900 - - OOG6_101133
Panther 1 1.100 - - LDO PTHR12146
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X688
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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