DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment car and SLY1

DIOPT Version :9

Sequence 1:NP_001259707.1 Gene:car / 32947 FlyBaseID:FBgn0000257 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_010475.1 Gene:SLY1 / 851770 SGDID:S000002597 Length:666 Species:Saccharomyces cerevisiae


Alignment Length:689 Identity:149/689 - (21%)
Similarity:252/689 - (36%) Gaps:171/689 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KVIVLDETMIGPLDLVTRPKLFADRGIRLLALKPELHLPREVANVVYVMRPRVALMEQLAAHVKA 100
            ||::||......:..|.|.......||.:.:|..:...|......:|.:.|....::.:...:|:
Yeast    54 KVLILDIKSTATISSVLRVNDLLKAGITVHSLIKQDRSPLPDVPAIYFVSPTKENIDIIVNDLKS 118

  Fly   101 GGRAAAGRQYHILFA---PRRSCLCVSQLEVSGVLGSFGNIEELAWNYLPLDV---DLVSMEMPN 159
            ...:    :::|.|.   ||.....::| :|| :.|....|:::...||...|   :|.|:|:.|
Yeast   119 DKYS----EFYINFTSSLPRNLLEDLAQ-QVS-ITGKSDKIKQVYDQYLDFIVTEPELFSLEISN 177

  Fly   160 AFRDVSVDGDTSS------LYQAAVGLVQLQRLYGRIPKI-YGKGEFAHRVWEHAKQLGRDER-- 215
            |:..:: |..|:.      ....|.||.........||.| ..||..|..:   |::||...|  
Yeast   178 AYLTLN-DPKTTEEEITGLCANIADGLFNTVLTINSIPIIRAAKGGPAEII---AEKLGTKLRDF 238

  Fly   216 ----------TLYNGD---KGVVDQLILLDRSIDLLSPLATQLTYEGLIDEFYGIRQNKLTLPAE 267
                      ||...|   :||   ||:|||:||..|..:....|:.::.:.:.:.:|.:|:|.|
Yeast   239 VINTNSSSTSTLQGNDSLERGV---LIILDRNIDFASMFSHSWIYQCMVFDIFKLSRNTVTIPLE 300

  Fly   268 NFPSDGALPGGGGSGPRVEESQSLLGDTEKKTILL---------HSGEQLYAELRNKHFNEVTKL 323
            :       ...|......:...:...|.|......         .:.|.:.|.|..  :.|....
Yeast   301 S-------KENGTDNTTAKPLATKKYDIEPNDFFWMENSHLPFPEAAENVEAALNT--YKEEAAE 356

  Fly   324 LARKAREIHV-QMHATSQDKSVQEIKSFVENLLPQLMAQKKATSEHTAIAGLLHEQVNAVRFADD 387
            :.||....:: .:...|.:.:|| |:..|:. ||:|.|:|.....|..|...|..|:.:......
Yeast   357 ITRKTGVTNISDLDPNSNNDTVQ-IQEVVKK-LPELTAKKNTIDTHMNIFAALLSQLESKSLDTF 419

  Fly   388 LAAEQE---------FMVCADI--DKPSAYIEDLIACRVELNRVLRLICMQCHAASG----FKEK 437
            ...||:         |:   ||  |..:..:||         ::...|.:...:.:|    |.:.
Yeast   420 FEVEQDPGSTKTRSRFL---DILKDGKTNNLED---------KLRSFIVLYLTSTTGLPKDFVQN 472

  Fly   438 LLNHYKRE------LVHVYGLEVLLTI--------------------SNLEKSGLLHLQTESR-- 474
            :.|::|..      |.:||.|...:.:                    |||..||:..| ||.:  
Yeast   473 VENYFKENDYDINALKYVYKLREFMQLSNMSLQNKSLEDGSDSAFKPSNLTLSGIYGL-TEGKLQ 536

  Fly   475 -----AYSVLRKTLHLTVDDNVEIEPKDISYVHSFYAPLTARIVEHSLKPLGWQTLKSQINNLPG 534
                 ..|.::|.|.         |.|.|        |:| .:|:..:.||.    .||.|    
Yeast   537 GGVGSLISGIKKLLP---------EKKTI--------PIT-NVVDAIMDPLN----SSQKN---- 575

  Fly   535 PTFEDFQAQLVGIGGRHTVTTVSEGSLLNVPR-----VVLVCFVGGCTFAEIAALRFLA-AQEDN 593
              .|...:.|      :....::.||....|:     ..||..|||..:.|...|:..| :|..|
Yeast   576 --LETTDSYL------YIDPKITRGSHTRKPKRQSYNKSLVFVVGGGNYLEYQNLQEWAHSQLHN 632

  Fly   594 NVEFLIATTKVVNKHSFLDSLMSSXGRRLSRLEAYRLSN 632
            ..:.:..:|.:.....||:        .:|||.|...||
Yeast   633 PKKVMYGSTAITTPAEFLN--------EISRLGASNSSN 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
carNP_001259707.1 Sec1 36..606 CDD:279352 141/661 (21%)
SLY1NP_010475.1 SEC1 11..661 CDD:227487 147/685 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.