DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment car and AT2G42700

DIOPT Version :9

Sequence 1:NP_001259707.1 Gene:car / 32947 FlyBaseID:FBgn0000257 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001189734.1 Gene:AT2G42700 / 818870 AraportID:AT2G42700 Length:867 Species:Arabidopsis thaliana


Alignment Length:630 Identity:127/630 - (20%)
Similarity:217/630 - (34%) Gaps:198/630 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KLFADRGIRLL--ALKPELHLPREVANVVYVMRPRVALMEQLAAHVKAGGRAAAGRQYHIL---- 113
            |:..|:|:...  ||:.....|.|..||                .:.:||........|..    
plant   150 KISKDKGVSKFSSALESLTMEPIESENV----------------DISSGGAQGLVVSVHHFPLII 198

  Fly   114 --FAPRRSCLCVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSMEMPNAFRDVSVDGD------- 169
              |.||           :.||.|.|::.|.:.:  ....|.:|..:|........|.|       
plant   199 CPFTPR-----------AFVLPSQGSVAEASLS--RQHEDSLSFGLPPISTGSMSDTDDVPPGAT 250

  Fly   170 --TSSLYQAAVGL-VQLQRLYGRIPKIYGKGEFAHRVWEHAKQLGR---DERTLYNGDKGVVDQ- 227
              ...|||.|:.: ::|:        |:..|       :.:|.:|:   |..::|:    |..: 
plant   251 LTAHFLYQLALKMELKLE--------IFSLG-------DQSKNVGKILTDMSSVYD----VARRK 296

  Fly   228 ----LILLDRSIDLLSPLATQLTYEGLIDEFYGIRQNKLTLP-AENFPSDGALPGGGGSGPRVE- 286
                |:|:||::||::|....   :.|.|..:.      :|| ||.|.|...|..|..|..|.. 
plant   297 RSAGLLLVDRTLDLITPCCHG---DSLFDRIFS------SLPRAERFSSQAQLKQGVPSINRPSL 352

  Fly   287 ESQSLLGD--TEKKTILLHSG--EQLYAELRNKHFNEVTKLLARKAREIHVQMHATSQDKSVQEI 347
            :.|..||:  .|:.:.:..||  |.:.|.||.                      ..|...:.|.:
plant   353 DVQVPLGELLNEEPSKIRDSGLPEGIEAFLRG----------------------WDSYTSAPQNV 395

  Fly   348 KSFVENLLPQLMAQKKATSEHTAIAGLLHEQVNAVRFADDLAAEQEFMVCADIDKPSAYIEDLIA 412
            ..|.|       ..||:|:..|       |.:|.            .:|..:..:.:.|:|.:|.
plant   396 GLFNE-------CDKKSTTNWT-------ELLNG------------SLVATECFRGTPYLEAMID 434

  Fly   413 CRVELNRVLRLICMQCHAASGFKEKLLNHYKRELVHVYGLEVLLTISNLE-KSGLL---HLQTES 473
            .:.:...||            .|:.|....:||.:.|          |:. :.|..   .||...
plant   435 RKTKDGSVL------------VKKWLQEALRRENISV----------NVRARPGYATKPELQAMI 477

  Fly   474 RAYSVLRKTLHLTVDDNVEIEPKDISYVHSFYAPLTARIVEHSLKPLGWQTLKS---QINNLPGP 535
            :|.|..:.:|         ::.|.|..:    ...||..::.| :...|.|..|   .:|...|.
plant   478 KALSQSQSSL---------LKNKGIIQL----GAATAAALDES-QSAKWDTFSSAEMMLNVSAGD 528

  Fly   536 TFEDFQAQLVGIGGRHTVTTV----------SEGSLLNVPRVVLVCFVG----GCTFAEIAALRF 586
            |.:...||:..:..:..|..:          |...||:....:|:..||    |..|....:...
plant   529 TSQGLAAQISDLINKSAVAELQAKKNEKPDSSSRGLLSFRDALLLTIVGYILAGENFPTSGSGGP 593

  Fly   587 LAAQEDNNVEFLIATTKVVNKHS----FLDSLMSSXGRRLSRLEA 627
            .:.||::.::..|....:.|..:    ||:.|... ..||:||::
plant   594 FSWQEEHFLKEAIVDAVLENPSAGNLKFLNGLTEELEGRLNRLKS 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
carNP_001259707.1 Sec1 36..606 CDD:279352 119/603 (20%)
AT2G42700NP_001189734.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11679
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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