DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment car and VPS33A

DIOPT Version :9

Sequence 1:NP_001259707.1 Gene:car / 32947 FlyBaseID:FBgn0000257 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_075067.2 Gene:VPS33A / 65082 HGNCID:18179 Length:596 Species:Homo sapiens


Alignment Length:627 Identity:276/627 - (44%)
Similarity:382/627 - (60%) Gaps:47/627 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFPHLKGHGQRVNLQLLQEAACRELLQQLDRIEGSKVIVLDETMIGPLDLVTR---------PKL 56
            |..|| .:| ||||.:|:||..|||.:.||:..|||.||.||.:.||..|:.:         .|:
Human     1 MAAHL-SYG-RVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEVEKM 63

  Fly    57 FADRGIRLLALKPELHLPREVANVVYVMRPRVALMEQLAAHVKAGGRAAAGRQYHILFAPRRSCL 121
            |..:|.||.|        .:|.|:::.:|||:.||:.:|.:|.:..|....|.:||||.||||.|
Human    64 FTLKGNRLPA--------ADVKNIIFFVRPRLELMDIIAENVLSEDRRGPTRDFHILFVPRRSLL 120

  Fly   122 CVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSMEMPNAFRDVSVDGDTSSLYQAAVGLVQLQRL 186
            |..:|:..||||||.:.||.:.:.:|.|.||:|||...||::..::||.:|||.||.||:.||.|
Human   121 CEQRLKDLGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHAAKGLMTLQAL 185

  Fly   187 YGRIPKIYGKGEFAHRVWEHAKQLGRDERTLYNGDKGVVDQLILLDRSIDLLSPLATQLTYEGLI 251
            ||.||:|:||||.|.:|.....::.|:.....|....|.|.|:||||::|||:||||||||||||
Human   186 YGTIPQIFGKGECARQVANMMIRMKREFTGSQNSIFPVFDNLLLLDRNVDLLTPLATQLTYEGLI 250

  Fly   252 DEFYGIRQNKLTLPAENF-PSDGALPGGGGSG-PRVEESQSLLGDTEKKTILLHSGEQLYAELRN 314
            ||.|||:.:.:.||.|.| |..   .|.||.. |           ||.|.:.|:|.|:||||:|:
Human   251 DEIYGIQNSYVKLPPEKFAPKK---QGDGGKDLP-----------TEAKKLQLNSAEELYAEIRD 301

  Fly   315 KHFNEVTKLLARKAREIHVQMHATSQDKSVQEIKSFVENLLPQLMAQKKATSEHTAIAGLLHEQV 379
            |:||.|..:|::||:.|..........|:|.|||.||.. ||.:.|.:.:.:.||:||.|:.:..
Human   302 KNFNAVGSVLSKKAKIISAAFEERHNAKTVGEIKQFVSQ-LPHMQAARGSLANHTSIAELIKDVT 365

  Fly   380 NAVRFADDLAAEQEFMVCADIDKPSAYIEDLIACRVELNRVLRLICMQCHAASGFKEKLLNHYKR 444
            .:..|.|.|..|||||...|.||.:.||||.||.:..|.:||||:|:|....||.|:|:|::|||
Human   366 TSEDFFDKLTVEQEFMSGIDTDKVNNYIEDCIAQKHSLIKVLRLVCLQSVCNSGLKQKVLDYYKR 430

  Fly   445 ELVHVYGLEVLLTISNLEKSGLLHLQTESR-AYSVLRKTLHLTVDDNVEIEPKDISYVHSFYAPL 508
            |::..||.|.:||:.||||:|||..||..| .|..:||||.|.:||..|..|.|||||:|.||||
Human   431 EILQTYGYEHILTLHNLEKAGLLKPQTGGRNNYPTIRKTLRLWMDDVNEQNPTDISYVYSGYAPL 495

  Fly   509 TARIVEHSLKPLGWQTLKSQINNLPGPTFEDFQAQLVGIGGRHTVTTVSEGSLLNVPRVVLVCFV 573
            :.|:.:...:| ||::::..:..||||.||:.|....|:..:.     ..|.    .||.|:.|:
Human   496 SVRLAQLLSRP-GWRSIEEVLRILPGPHFEERQPLPTGLQKKR-----QPGE----NRVTLIFFL 550

  Fly   574 GGCTFAEIAALRFLAAQEDNNVEFLIATTKVVNKHSFLDSLM 615
            ||.|||||||||||:..||...|::|||||::|..|::::||
Human   551 GGVTFAEIAALRFLSQLEDGGTEYVIATTKLMNGTSWIEALM 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
carNP_001259707.1 Sec1 36..606 CDD:279352 254/581 (44%)
VPS33ANP_075067.2 Sec1 34..584 CDD:395791 254/582 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165140554
Domainoid 1 1.000 424 1.000 Domainoid score I616
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11294
Inparanoid 1 1.050 451 1.000 Inparanoid score I1612
Isobase 1 0.950 - 0 Normalized mean entropy S3097
OMA 1 1.010 - - QHG53951
OrthoDB 1 1.010 - - D406738at2759
OrthoFinder 1 1.000 - - FOG0002117
OrthoInspector 1 1.000 - - oto89139
orthoMCL 1 0.900 - - OOG6_101460
Panther 1 1.100 - - LDO PTHR11679
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1650
SonicParanoid 1 1.000 - - X1571
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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