DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment car and stxbp1a

DIOPT Version :9

Sequence 1:NP_001259707.1 Gene:car / 32947 FlyBaseID:FBgn0000257 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_005161170.1 Gene:stxbp1a / 574003 ZFINID:ZDB-GENE-050626-106 Length:603 Species:Danio rerio


Alignment Length:637 Identity:125/637 - (19%)
Similarity:240/637 - (37%) Gaps:85/637 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EAACRELLQQLDRIEGSKVIVLDETMIGPLDLVTRPKLFADRGIRLLALKPELHLPREVANVVYV 83
            |....::::::.:....|.:::|:..:..|....:.......||.::....:...|......:|:
Zfish    12 EKIMNDVIKKVKKKGEWKALIVDQLSMRMLSSCCKMTDIMTEGITIVEDIMKRREPLPSLEAIYL 76

  Fly    84 MRPRVALMEQLAAHVKAGGRAAAGRQYHILFAPRRSCLCVSQLEVSGVLGSFGNIEELAWNYLPL 148
            :.|....::.|....| ...:|..:..|:.|.........:::..|....:...:.|:...:||.
Zfish    77 ITPTDKSVQTLINDFK-DPHSAKYKGAHVFFTDSCPDPLFNEVVKSRASKTIKTLNEINIAFLPY 140

  Fly   149 DVDLVSMEMPNAFRDVSVDGDTS----SLYQAAVGLVQLQRLYGRIPKIYGKGEF------AHRV 203
            :..:.|::.|:||:.......|.    .:.:.|..|..|.......|.:..:||:      |..:
Zfish   141 ESQVFSLDNPDAFQSFYSPHKTQLKNPVMERLAEQLATLCATLKEYPAVRYRGEYKDNATLAQLL 205

  Fly   204 WEHAKQLGRDERTLYNGDKGVVDQLILLDRSIDLLSPLATQLTYEGLIDEFYGIRQNKLTLPAEN 268
            .:.......|:.|:..|......|||:|||..|.:||:..:||::.:..:.         ||.||
Zfish   206 QDKLDAYKADDPTMGEGPDKARSQLIILDRGFDPVSPVLHELTFQAMAYDL---------LPIEN 261

  Fly   269 ----FPSDGALPGGGGSGPRVEESQSLLGDTEKKTILLHSGEQLYAELRNKHFNEVTKLLARKAR 329
                :.:.|                  :||:.:|.:|||..:.|:..||:||..||::.:.|..:
Zfish   262 DVYKYDTSG------------------IGDSREKEVLLHEDDDLWVALRHKHIAEVSQEVTRSLK 308

  Fly   330 EIHVQMHATSQDKSVQEIKSFVENLLPQLMAQKKATSEHTAIAG--LLHEQVNA---VRFADDLA 389
            |........:.:|:.....|.:...:||...:....|.|..:|.  :.|.|...   .|...|||
Zfish   309 EFSASKRMNTGEKTTMRDLSQMLKKMPQYQKELSKYSTHLQLAEDCMKHYQGTVDKLCRVEQDLA 373

  Fly   390 ----AEQEFMVCADIDKPSAYIEDLIACRVELNRVLRLICMQCHAASGFKE----KLLNHYKREL 446
                ||.|.:.    |...|.:..|:...|.....:|:|.:.....:|..|    ||:.|.:   
Zfish   374 MGTDAEGEKIK----DPMRAIVPILLDANVTTYDKIRIILLYIFLKNGITEENLNKLIQHAQ--- 431

  Fly   447 VHVYGLEVLLTISNLEKSGLLHLQTESRAYSVLRKTLHLTVDDNVEIEPKDISYVHSFYAPLTAR 511
            :.....|::        :.:.||.......|.||:...:...:.|    .:.:|..|.:.||...
Zfish   432 IPPEDSEII--------TNMAHLGVPIITDSTLRRGKKMDRKERV----SEQTYQLSRWTPLIKD 484

  Fly   512 IVEHSLKPLGWQTLKSQINNLP---GPTFEDFQAQLVGIGGRHTVTTVSEGSLLNVPRVVLVCFV 573
            |:|.::..      |....:.|   ..:...|....|.....|.....:.|.....|| ::|..:
Zfish   485 IMEDAIDD------KLDTKHYPYISTRSSSSFSTSAVSARYGHWHKNKTPGEYRTGPR-IMVFII 542

  Fly   574 GGCTFAEIAALRFLAAQEDNNVEFLIATTKVVNKHSFLDSLMSSXGRRLSRL 625
            ||.:|:|:.. .:...|.:...|.::.:|..:....||..|... .|..:|:
Zfish   543 GGASFSEMRC-AYEVTQANGKWEAIVGSTHSLTPTKFLMDLRHPDFRESTRV 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
carNP_001259707.1 Sec1 36..606 CDD:279352 119/599 (20%)
stxbp1aXP_005161170.1 Sec1 29..575 CDD:279352 119/600 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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