DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment car and stxbp2

DIOPT Version :9

Sequence 1:NP_001259707.1 Gene:car / 32947 FlyBaseID:FBgn0000257 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_998454.1 Gene:stxbp2 / 406578 ZFINID:ZDB-GENE-040426-2482 Length:595 Species:Danio rerio


Alignment Length:632 Identity:112/632 - (17%)
Similarity:221/632 - (34%) Gaps:130/632 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KVIVLDETMIGPLDLVTRPKLFADRGIRLLALKPELHLPREVANVVYVMRPRVALMEQLAAHVKA 100
            ||:::|...:..|....:.......|:.::....:...|......:|::.|....:..|.|..:.
Zfish    29 KVLIVDHISMRILSSCCKMSDIMAEGVTIVEDISKRREPIPSLEAIYLISPVPKSVHALIADFRE 93

  Fly   101 GGRAAAGRQYHILFAPRRSCLCVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSMEMPNAFR--- 162
              .|...:..|:.|.........:::..|.|......::|:...::|.:..:.:::.|::|.   
Zfish    94 --TAFTYKAAHVFFTDTCPDGLFAEIGRSRVAKVIKTLKEINVAFIPYESQVFTLDNPSSFHAFY 156

  Fly   163 ---DVSVDGDTSSLYQAAVGLVQLQRLYGRIPKI-YGKG-----EFAHRVWEHAKQLGRDERTLY 218
               ..::|..:..:...|..:..|.......|.| |..|     ..|..|.:.......|...:.
Zfish   157 SPTQTNLDDKSRMMEAMAEQIATLCDTLTEYPAIRYRLGPKENFSLAEMVMDRLNAHKADNPRMG 221

  Fly   219 NGDKGVVDQLILLDRSIDLLSPLATQLTYEGLIDEFYGIRQNKLTLPAENFPSDGALPGGGGSGP 283
            .|......||:::||..|.:||:..:||::.:..:...|.|:     ...:.:.|          
Zfish   222 EGTDKARSQLLIVDRGYDPVSPILHELTFQAMAYDLLDIEQD-----IYRYQTAG---------- 271

  Fly   284 RVEESQSLLGDTEKKTILLHSGEQLYAELRNKHFNEVTKLLARKAREIHVQMHATSQDKSVQEIK 348
                    :|:...|.:||...::|:.:||:.|..:|||.:....|.........:...:::::.
Zfish   272 --------IGEARDKEVLLDEDDELWVQLRHMHIADVTKKVTELLRVFCDSKRMNTDKANIKDLS 328

  Fly   349 SFVENLLPQLMAQKKATSEHTAIAGLLHEQVNAVRFADDL----AAEQEFMVCADI------DKP 403
            ..::. :||...:....|.|..:|....:     :|.:.|    ..||:..:.:|.      |..
Zfish   329 QMLKK-MPQYQKELSLYSTHLNLADACMK-----KFKNTLDKLCEVEQDLAMGSDAQGEPLKDAM 387

  Fly   404 SAYIEDLIACRVELNRVLRLICMQC-HAASGFKE----KLLNHYK--------RELVHVYGLEVL 455
            .:.:..|:...::....:|:|.:.. |...|..|    ||:.|..        ..|.|: |..::
Zfish   388 KSIVPVLLNTEIKDYDKIRIILLYIFHKKKGIGEENLTKLIQHANVQQDKNIITNLQHL-GCPII 451

  Fly   456 LTISNLEKSGLLHL-----QTE-----SRAYSVLRKTLHLTVDDNVE-------IEPKDISYVHS 503
            ...:|..||    |     :||     ||...||:..:...:||..:       .||        
Zfish   452 TGGANSGKS----LPDRKERTESTYQLSRWIPVLKDVMENIIDDKCDRKQWPFLSEP-------- 504

  Fly   504 FYAPLTARIVEHSLKPLG-WQTLKSQINNLPGPTFEDFQAQLVGIGGRHTVTTVSEGSLLNVPRV 567
              ||:|......|....| |...||......||.                               
Zfish   505 --APITTTATTVSSARFGHWHKNKSATEYRSGPR------------------------------- 536

  Fly   568 VLVCFVGGCTFAEIAALRFLAAQEDNNVEFLIATTKVVNKHSFLDSL 614
            :::..:||.|.:|:.....:........|.||.::.::...|||:.|
Zfish   537 LIIFVIGGVTHSEMRCAYEVTRATGGKWEVLIGSSHIITPTSFLNDL 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
carNP_001259707.1 Sec1 36..606 CDD:279352 108/622 (17%)
stxbp2NP_998454.1 Sec1 29..576 CDD:279352 108/623 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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