DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment car and sly1

DIOPT Version :9

Sequence 1:NP_001259707.1 Gene:car / 32947 FlyBaseID:FBgn0000257 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_588374.1 Gene:sly1 / 2539096 PomBaseID:SPCC74.01 Length:639 Species:Schizosaccharomyces pombe


Alignment Length:717 Identity:132/717 - (18%)
Similarity:249/717 - (34%) Gaps:202/717 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QRVNLQLLQEAACRELLQQLDRIEGS----------KVIVLDETMIGPLDLVTRPKLFADRGIRL 64
            :...:|.|::..  .|.|.::.:|.|          ||::.|:.....:..|.|.......|:.:
pombe    13 REAQIQSLEKLL--NLNQDVNELESSPQHASNFPIWKVLIFDKAGSETISSVLRISDLRKHGVTV 75

  Fly    65 LALKPELHLPREVANVVYVMRPRVALMEQLAAHVKAGGRAAAGRQYHILFAPRRSCLCVSQLEVS 129
            .........|......:|.::|....:|.:...:..|...:|    ::.|:   |.:..:.||..
pombe    76 HMNITSFRQPIADVPAIYFVQPTQENIELIIEDLSKGLYESA----YVCFS---STISRALLEQF 133

  Fly   130 GVLGSFGNIEELA-------WNYLPLDVDLVSMEMPNAFRDVSVDGDTSSLYQAAV-----GLVQ 182
            ..|.|..|...:.       .||:.|:.|..|:::|..|..........:|..:.|     ||..
pombe   134 AELASKTNTSHMIHQVYDQYLNYVVLESDFFSLQLPKIFHTFHNPSSDEALINSRVQDIVNGLFS 198

  Fly   183 LQRLYGRIPKI-YGKGEFAHRVWEHAKQLGRDERTLYNGDKGVVDQ-------LILLDRSIDLLS 239
            :....|.||.| ..:|..|..|.:...|..:|.  |.|.....|..       ||||||::||:.
pombe   199 VIVTLGTIPIIRCPQGSAAEMVAQKLNQRLKDH--LMNTKDAFVSVNPKPRPILILLDRTVDLIP 261

  Fly   240 PLATQLTYEGLIDEFYGIRQNKLTLPAENFPSDGALPGGGGSGPRVEESQSLLGDTEKKTILLHS 304
            .:....||:.||.:...::.|::|:.:                  |::     |...|:...|..
pombe   262 MINHSWTYQALIHDTLNMQLNRITVES------------------VDD-----GKMTKRFYDLDG 303

  Fly   305 GEQLYAELRNKHFNEVTKLLARKAREIHVQMHATSQDKSVQEIKSFVENLLPQLMAQKKATSEHT 369
            .:..:....:|.|.:|                              .||:..:|...|...||.|
pombe   304 NDFFWESNASKPFPKV------------------------------AENIDEELTRYKNDASEIT 338

  Fly   370 AIAGLLH-EQVNAVRFADDLAAEQEFMVCADIDKPSAYIEDLIACRVELNRVLRLICMQCHAAS- 432
            ..:|:.. |:||...|||                 |.|::..::...||....:::.|..:.|: 
pombe   339 RKSGVSSLEEVNVDAFAD-----------------STYLKSAVSLLPELTARKQILDMHMNIATA 386

  Fly   433 ---GFKEKLLNHYKRELVHVYGLE---VLLTISNLEKSG---------LLHLQTESRAYSVLRKT 482
               ..:|:.|:.:.:...::.||.   :|..|:|.|:..         :.:|..:|...|.|:..
pombe   387 LLKAIQERHLDDFFQLEDNITGLNRSAILACINNKEQGTPEDKLRFFIIWYLSVDSVPASDLQAY 451

  Fly   483 LHLTVDDNVEIE-----------PKDISYVHSFYAPLTARIVEHSLKPLGWQTLKSQINNLPGPT 536
            ....|::...:|           .|......|...|.|.:..::..:  |:.:|.::..:    .
pombe   452 EEALVNNGCTLEALNFVKRVREITKMTMLASSTTRPATGQTGDNLFR--GFSSLSTRFTD----R 510

  Fly   537 FEDFQAQLVGIGGRH----------------TVTTV---------------SEGSLL-------- 562
            |::     .||||..                |:|::               :|..||        
pombe   511 FKE-----AGIGGLENIISGVRNLIPFRKDGTITSIVQSLMDPGSSPASKQTESYLLLDPKSARA 570

  Fly   563 ----NVPRVV---------LVCFVGGCTFAEIAALRFLAAQEDNNVEFLIATTKVVNKHSFLDSL 614
                |.||.:         :||.:||..:.|...|...|.:::.....:..:|.:::...|::.:
pombe   571 ITVNNDPRAMNKRQTFSEAIVCVLGGGNYLEYGNLADWAREQNPKKRIIYGSTDILSPSEFMEEM 635

  Fly   615 MS 616
            .|
pombe   636 AS 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
carNP_001259707.1 Sec1 36..606 CDD:279352 124/669 (19%)
sly1NP_588374.1 SEC1 10..639 CDD:227487 132/717 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.