DRSC/TRiP Functional Genomics Resources

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Protein Alignment car and SCFD1

DIOPT Version :9

Sequence 1:NP_001259707.1 Gene:car / 32947 FlyBaseID:FBgn0000257 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_057190.2 Gene:SCFD1 / 23256 HGNCID:20726 Length:642 Species:Homo sapiens


Alignment Length:720 Identity:141/720 - (19%)
Similarity:262/720 - (36%) Gaps:212/720 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QEAACRELLQ-QLDRIEGS------KVIVLD---ETMIGPLDLVTRPKLFADRGIRLLALKPELH 72
            |..|.:.:|. .:..|:.|      ||::.|   :.:|.||..|   |...|.||.|..|   ||
Human    19 QTVALKRMLNFNVPHIKNSTGEPVWKVLIYDRFGQDIISPLLSV---KELRDMGITLHLL---LH 77

  Fly    73 LPRE-VANV--VYVMRPRVALMEQLAAHVKAGGRAAAGRQYHILFAPRRSCLCVSQLE------- 127
            ..|: :.:|  ||.:.|....::::...:    |......|::.|.   |.:..|:||       
Human    78 SDRDPIPDVPAVYFVMPTEENIDRMCQDL----RNQLYESYYLNFI---SAISRSKLEDIANAAL 135

  Fly   128 VSGVLGSFGNIEELAWNYLPLDVDLVSMEMPN----AFRDVS------------VDGDTSSLYQA 176
            .:..:.....:.:...|::.|:.|:..:...|    ::|.::            :|....||:..
Human   136 AASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETVMDTIVDSLFCF 200

  Fly   177 AVGLVQLQRLYGRIPKI-YGKGEFAHRVWEHAKQLG-------RDER-TLYNGDKGVVDQ----- 227
            .|.|       |.:|.| ..:|..|..|   |.:|.       ||.| :|:.||.....|     
Human   201 FVTL-------GAVPIIRCSRGTAAEMV---AVKLDKKLRENLRDARNSLFTGDTLGAGQFSFQR 255

  Fly   228 --LILLDRSIDLLSPLATQLTYEGLIDEFYGIRQNKLTLP----AENFPSDGALPGGGGSGPRVE 286
              |:|:||:|||.:||....||:.|:.:......|::.|.    .||.|:        |:.|:.:
Human   256 PLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPA--------GARPKRK 312

  Fly   287 ESQSLLGDTEKKTILLHSGEQLYAELRNKHFNEVTKLLARKAREIHVQMHATSQDKSVQEIKSFV 351
                     .||:..|...::.:.:.:...|.||.:.:.::......|.....:.||:..::...
Human   313 ---------NKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEGED 368

  Fly   352 E-----------------NLLPQLMAQKKATSEHTAIAGLLHEQVNAVRFADDLAAEQEFMVCAD 399
            |                 :.||:|:.:|:....||.:|..:.|.:.|.:.......|::.|....
Human   369 EGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTT 433

  Fly   400 IDKPSAYIEDLIACRVELNRVLRLICMQCHAASGFKEKLLNHYKRELVHVYGLEVLLTISNLEKS 464
            :||.   :.|:|:                ...:|..|..:..:   |::....:...:.::||: 
Human   434 LDKS---LLDIIS----------------DPDAGTPEDKMRLF---LIYYISTQQAPSEADLEQ- 475

  Fly   465 GLLHLQTESRAYSVLRKTLHLTVDDNVEIEPKDISYVHSF-----YAPLTARIVEHSLKPLGWQT 524
                          .:|.|   .|....:.|  :.|:..:     .|...|.....:.||:|..:
Human   476 --------------YKKAL---TDAGCNLNP--LQYIKQWKAFTKMASAPASYGSTTTKPMGLLS 521

  Fly   525 ------------------LKSQINNLP-------------GPTFEDFQAQLVGIGGRHTVTTVSE 558
                              ||.|  |||             .|..:|:         |:....:..
Human   522 RVMNTGSQFVMEGVKNLVLKQQ--NLPVTRILDNLMEMKSNPETDDY---------RYFDPKMLR 575

  Fly   559 GSLLNVPR------VVLVCFVGGCTFAEIAAL-RFLAAQEDNNVEFLIATTKVVNKHSFLDSLMS 616
            |:..:|||      ..:|..|||..:.|...| .::..::..::  |...:::.|...|:..| |
Human   576 GNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLVDYIKGKQGKHI--LYGCSELFNATQFIKQL-S 637

  Fly   617 SXGRR 621
            ..|::
Human   638 QLGQK 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
carNP_001259707.1 Sec1 36..606 CDD:279352 131/678 (19%)
SCFD1NP_057190.2 Sec1 44..629 CDD:307231 131/679 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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