DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment car and Stxbp2

DIOPT Version :9

Sequence 1:NP_001259707.1 Gene:car / 32947 FlyBaseID:FBgn0000257 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001344097.1 Gene:Stxbp2 / 20911 MGIID:107370 Length:594 Species:Mus musculus


Alignment Length:637 Identity:126/637 - (19%)
Similarity:228/637 - (35%) Gaps:142/637 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KVIVLDETMIGPLDLVTRPKLFADRGIRLLALKPELHLPREVANVVYVMRPRVALMEQLAAHVKA 100
            ||:::|...:..|....:.......||.::....:...|......:|::.|....::.|.|..: 
Mouse    29 KVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIADFQ- 92

  Fly   101 GGRAAAGRQYHILFAPRRSCLCVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSMEMPNA----- 160
            |......:..||.|.........|:|..|.:..:...::|:...:||.:..:.|::.|::     
Mouse    93 GTPTFTYKAAHIFFTDTCPEPLFSELGRSRLAKAVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLY 157

  Fly   161 --FRDVSVDGDTSSLYQAAVGLVQLQRLYGRIPKI-YGKG-----EFAHRVWEHAKQLGRDERTL 217
              ||.........:|.|....|....:.|   |.| |.||     :.||.|.........|..:|
Mouse   158 CPFRAGERGRQLDALAQQIATLCATLQEY---PSIRYRKGPEDTAQLAHAVLAKLNAFKADTPSL 219

  Fly   218 YNGDKGVVDQLILLDRSIDLLSPLATQLTYEGLIDEFYGIRQNKLTLPAENFPSDGALPGGGGSG 282
            ..|.:....||:::||:.|.:|||..:||::.:..:...|.|:     ...:.:.|         
Mouse   220 GEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLDIEQD-----TYRYETTG--------- 270

  Fly   283 PRVEESQSLLGDTEKKTILLHSGEQLYAELRNKHFNEVTKLLARKAREIHVQMHATSQDKSVQEI 347
                     |.::.:|.:||...:.|:.|||:.|..:|:|.:....:........|:...:::::
Mouse   271 ---------LSESREKAVLLDEDDDLWVELRHMHIADVSKKVTELLKTFCESKRLTTDKANIKDL 326

  Fly   348 KSFVENLLPQLMAQKKATSEHTAIAGLLHEQVNAVRFADD------------LAAEQEFMVCADI 400
             |.:...:||...:....|.|      ||       .|||            .:.||:..:.:|.
Mouse   327 -SHILKKMPQYQKELNKYSTH------LH-------LADDCMKHFKGSVEKLCSVEQDLAMGSDA 377

  Fly   401 ------DKPSAYIEDLIACRVELNRVLRLICMQCHAASGFKE----KLLNHYK--------RELV 447
                  |.....:..|:...|.....:|::.:.....:|..|    ||:.|..        |.|.
Mouse   378 EGEKIKDAMKLIVPVLLDASVPPYDKIRVLLLYILLRNGVSEENLAKLIQHANVQSYSSLIRNLE 442

  Fly   448 HVYGLEVLLTISNLEKSGLLHLQTESRAYSVLRKTLHLTVDDNVEIEPKDISYVHSFYAP----L 508
            .:.|     |::|...||     |.||            ::....:||   :|..|.::|    :
Mouse   443 QLGG-----TVTNSAGSG-----TSSR------------LERRERMEP---TYQLSRWSPVIKDV 482

  Fly   509 TARIVEHSLKPLGWQTLKSQINNLPGPT-----------FEDFQAQLVGIGGRHTVTTVSEGSLL 562
            ...:||..|....|..:..     |.|.           |..:.....|:..|..          
Mouse   483 MEDVVEDRLDRKLWPFVSD-----PAPVPSSQAAVSSARFGHWHKNKAGVEARAG---------- 532

  Fly   563 NVPRVVLVCFVGGCTFAEIAALRFLAAQEDNNVEFLIATTKVVNKHSFLDSL 614
              ||:: |..|||...:|:.|...:....:...|.||.::.::....|||.|
Mouse   533 --PRLI-VYIVGGVAMSEMRAAYEVTRATEGKWEVLIGSSHILTPTRFLDDL 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
carNP_001259707.1 Sec1 36..606 CDD:279352 122/627 (19%)
Stxbp2NP_001344097.1 Sec1 29..574 CDD:307231 122/628 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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